Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02859	ATGGAAATTGGTATAGCACTAGGTTTGGATAATCAAGACGGATCTTTGAAACTTTCCATGATGGAGTGTAATTGTCAAATACATGATATCTCCATAGACCTAGATGGAGGAGCATCTTGGCTCTATCAAGGGATTGTCAATGCTTTCAAAGAAGAAATAGTGTCAGCAGTAGAAAAGGCAATTACCAAGAAATTGAAGACTGAAATTTCAGAGCTTGGATCTATTCTACGAACTCTTCCAAAACAAATTTCAGTGGATGATACTTCCTCATTAAATGTTACATTTGTTAACAGCCCGTTCTTGAGTGACTCTTCATTAGGGTTCGAGATAAATGGGTTATTCGTAGATTCAAAAACCGATCCGCGTGCATATCACAACCATTTGCAGCCACCACTTGCTTGTTCAGACTCTCCAAAAATGGTTGGAATTGCCCTAGATGAAGCTGTTTTCAAATCTGCATCTGCCTTATACTACGATGCTACGTTTATGCACTGGATTGTTGATAAAGTACCCGAACAATCTCTTCTTAACACAGCTGGGTGGAGATTTATTGTTCCTCAACTCTACAAAAAGTACCCAAATGCTGATATGAATTTGGATATTTCTCTTTCTAATCCTCCAGTTGTGCAAATATCATCACAGAAAATTGGTGCCACAGTTTATGCAGATTTGATCATAGATGTTCTTAAAGGAGATGAGACAATCCCCGTAGCTTGTATCTCATTGGAAATTGCTGGCACAGGCTCGGTACAAATAAACAGAAATAACCTTACTGGTCATTTGAAAATGGATGATTTCACCATGACGTTAAAATGGAGCAAGATTGGCACCTTGCACATGTTTCTCATTCAGCCAATGATGTGGACTATGATCGAAACTGTTTTCATACCATATGCGAATGCACGACTTGGGACAGGGTTCCCTTTGCCTATAATACATGGCTTTTTGCTTGAAAATGCTGAGATAATATCCTCAGATTCTAGAATCACAGTGTGCAGCGACGTTAGCTATGAGGAATCCATTTATAGCAGCCAAACTCGATTTTACTCATCATAG	1056	38.92	MEIGIALGLDNQDGSLKLSMMECNCQIHDISIDLDGGASWLYQGIVNAFKEEIVSAVEKAITKKLKTEISELGSILRTLPKQISVDDTSSLNVTFVNSPFLSDSSLGFEINGLFVDSKTDPRAYHNHLQPPLACSDSPKMVGIALDEAVFKSASALYYDATFMHWIVDKVPEQSLLNTAGWRFIVPQLYKKYPNADMNLDISLSNPPVVQISSQKIGATVYADLIIDVLKGDETIPVACISLEIAGTGSVQINRNNLTGHLKMDDFTMTLKWSKIGTLHMFLIQPMMWTMIETVFIPYANARLGTGFPLPIIHGFLLENAEIISSDSRITVCSDVSYEESIYSSQTRFYSS	351

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02859	351	SMART	bpi2-2	135	333	IPR001124	GO:0008289(InterPro)
	Soca5g02859	351	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	105	337	IPR017943	GO:0008289(InterPro)
	Soca5g02859	351	Gene3D	-	72	338	-	-
	Soca5g02859	351	Pfam	LBP - BPI - CETP family, C-terminal domain	135	337	IPR001124	GO:0008289(InterPro)
	Soca5g02859	351	CDD	BPI2	140	336	-	-
	Soca5g02859	351	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	3	102	IPR017943	GO:0008289(InterPro)
	Soca5g02859	351	Gene3D	-	1	71	-	-
	Soca5g02859	351	PANTHER	OS06G0309200 PROTEIN	1	346	IPR045897	-
	Soca5g02859	351	Pfam	LBP - BPI - CETP family, N-terminal domain	4	71	IPR017942	GO:0008289(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02859	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:31572369	Soca5g02860	Soca-Chr5:31572369	tandem