Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02885	ATGGCTTCGAGTTCTGAAATAGGGCTTGCAGCAGCTACAAACATATTAATGGCATTTGTATTTTTGGTTGCATTTGCTATACTTAGGATTCAGCCGCTTAACGATAGAGTGTATTTTCCGAAATGGTATTTAAAAGGGTTAAGAAACGATCCACTTCAATCAGGTGTGTTTGTGCAGAAGTTTGTGAACTTGGATTTCAGATCATACTTGAGGTTTTTGAACTGGATGCCTGCTGCATTGCACATGCCAGAACCCGAGCTTATTGATCATGCAGGACTGGATTCTGTTGTTTACTTGAGAATTTACTTGACAGGACTCAAAATATTTGTTCCAATTGCATGCCTTGCTTTCGCAGTCATGGTGCCTGTCAATTGGACTAATCGGACTTTGGAGCAGTCAAAATTAACATATAGTGACATTGACAAGCTTTCAATATCCAACATTCCAACCGGATCAAACAGGTTTTGGACACATATAGTCATGGCTTACGCCTTTACCTTTTGGACATGCTATATTTTGAAAAGAGAGTATGAGATAATTGCATCAATGAGGTTGCATTTTATTGCATCAGAACAACGAAGGCCTGATCAATTTACTGTGCTCGTGAGAAATGTGCCATCAGACCCTGATGAGACAGTCAGTGAGCTTGTGGAGCACTTTTTTCTTGTCAATCATCCAGATCAGTATTTGTGTCATCAGGTCGTTTATAATGCAAATGCACTCTCTAAATTGGTTAATGAGAAGAAAACAAAGCAAAATTGGCTTGACTACTATCAACTGAAATATAATAGAAATAACCATTCAAAAAGGCCATCAATGAAGACTGGTTTTCTTGGCCTGCACGGTAAGAGCGTGGATGCTATTGATTATTATCAATCCGAGATTGAGAAACTAATAAAACAGATAGGTAAAGAGAGGGAAAAGGTTACTACAAGCTCCAAATACGTTGTGCCAGCTGCATTTGTTTCTTTTAAATCACGATGGGGTGCTGCGGTTTGTGCACAAACTGAACAATCCAGGAACCCAACTATCTGGTTAACCGAGTGGGCCCCAGAACCCCGTGATGTTTATTGGGATAATCTTGCCATTCCATTTGTTTCACTCACAATTAGAAGACTTGTTATTGCTGTGGCCTTTTTCTTCCTTACGTTTTTCTTCATGATCCCAATAGCATTTGTACAGTCACTTGCAAATATTGATGGCATAGTGAAAGCAGCTCCTTTCTTGCAAGGCATTATGGAAGTGAAATTTGTCAAATCTTTCATACAAGGTGTTCTTCCAGGAATCGCTTTGAAGATCTTCCTCATCATTCTACCTTCAATCTTGATGATGATGTCTAAGTTTGAAGGATTCACCTCTATATCAGCTCTAGAGAGAAGATCTGCAACAAGATATTATATTTTTCAATTTATCAATGTCTTTCTTGGGAGCATAATTACTGGGACTGCATTTCAACAGCTAAAAACCTTCATTCACCAGTCTGCAAACACTATCCCAATGACAATTGGTTCATCTATACCAATGAAAGCAACCTTCTTTATAACTTATATCATGGTCGATGGATGGGCTGGAGTTGCTGGGGAGATTCTGAGGTTAAAACCACTGATATTCTATCACTTGAAGAATTTTCTCTTGGTGAAAACCGAAAAGGACAGAGAAGAGGCAATGAATCCTGGAAGTTTGTCTTTCAACACGGGGGAACCTCAAATCCAGCTTTATTTCTTACTTGGCCTTGTTTATGCTGTTATCACCCCGATTCTGCTTCCTTTTATAGTAGTATTCTTCGCCTTGGCTTACTTGGTGTACCGTCATCAGATTATAAATGTGTACAATCAACAGTATGAGAGTGCAGGATCTTTCTGGCCAGATGTACATGGCCGTATTATAACTGCACTAATTGTTTCCCAGTTGCTTTTGATGGGTCTTCTTAGCACAAAAGAAGCTGTGAATTCAACCCCATTGCTTATAGTGCTCCCTGTGCTCACCATATGGTTCCATAGATTCTGTAAAGGACGGTTTGAACCAGCTTTTGTTAGGTATCCTTTACAGGAGGCAATGATCAAAGATACACTAGAGCGCACAAGGGAACCATGTCTAAATGTCAAAGTTTATCTAGAAAATGCATACGTTCACCCAGTTTTCAATAATGAAGACAGATGGGATGGGAGTGATGATGGATTTAGTGATGAAGAGAACCCAAAAGAACCTGCTCTAGTCCCCACAAAGCGTCCTTCACGAACAAACACACCAGCGCGAAGTCAACGTAGCGAGTCAACACGAACCTTGTTGTGTGTTACAGATGAAAGATCTTGTCCATAA	2319	39.8	MASSSEIGLAAATNILMAFVFLVAFAILRIQPLNDRVYFPKWYLKGLRNDPLQSGVFVQKFVNLDFRSYLRFLNWMPAALHMPEPELIDHAGLDSVVYLRIYLTGLKIFVPIACLAFAVMVPVNWTNRTLEQSKLTYSDIDKLSISNIPTGSNRFWTHIVMAYAFTFWTCYILKREYEIIASMRLHFIASEQRRPDQFTVLVRNVPSDPDETVSELVEHFFLVNHPDQYLCHQVVYNANALSKLVNEKKTKQNWLDYYQLKYNRNNHSKRPSMKTGFLGLHGKSVDAIDYYQSEIEKLIKQIGKEREKVTTSSKYVVPAAFVSFKSRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTIRRLVIAVAFFFLTFFFMIPIAFVQSLANIDGIVKAAPFLQGIMEVKFVKSFIQGVLPGIALKIFLIILPSILMMMSKFEGFTSISALERRSATRYYIFQFINVFLGSIITGTAFQQLKTFIHQSANTIPMTIGSSIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFLLVKTEKDREEAMNPGSLSFNTGEPQIQLYFLLGLVYAVITPILLPFIVVFFALAYLVYRHQIINVYNQQYESAGSFWPDVHGRIITALIVSQLLLMGLLSTKEAVNSTPLLIVLPVLTIWFHRFCKGRFEPAFVRYPLQEAMIKDTLERTREPCLNVKVYLENAYVHPVFNNEDRWDGSDDGFSDEENPKEPALVPTKRPSRTNTPARSQRSESTRTLLCVTDERSCP	772

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02885	772	Pfam	Calcium-dependent channel, 7TM region, putative phosphate	371	643	IPR003864	GO:0016020(InterPro)
	Soca5g02885	772	PANTHER	PROBABLE MEMBRANE PROTEIN DUF221-RELATED	8	723	IPR045122	GO:0005227(InterPro)\|GO:0005227(PANTHER)\|GO:0005886(PANTHER)
	Soca5g02885	772	Pfam	Cytosolic domain of 10TM putative phosphate transporter	197	360	IPR027815	-
	Soca5g02885	772	MobiDBLite	consensus disorder prediction	721	737	-	-
	Soca5g02885	772	MobiDBLite	consensus disorder prediction	742	760	-	-
	Soca5g02885	772	Pfam	Late exocytosis, associated with Golgi transport	9	176	IPR032880	-
	Soca5g02885	772	Coils	Coil	288	308	-	-
	Soca5g02885	772	MobiDBLite	consensus disorder prediction	721	760	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02885	K21989	calcium permeable stress-gated cation channel

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:8842729	Soca5g02885	Soca-Chr5:31941285	dispersed
	Soca	Soca-Chr5:19513456	Soca5g02885	Soca-Chr5:31941285	dispersed
	Soca	Soca-Chr5:31941285	Soca7g01167	Soca-Chr7:21860653	dispersed
	Soca	Soca-Chr5:31941285	Soca5g02885	Soca-Chr5:31941285	tandem
	Soca	Soca-Chr5:31941285	Soca5g02886	Soca-Chr5:31941285	tandem