AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g02892 ATGGACTATGGTGATCATATCCCGACAGATCTAATCACCAAATCCCAGATCGGATTTCGAGAACTCGCCGGTTTGTCATCCTTCAATCCAACCTTACAGGCATCTTCACTCCCAACCACCACCATTGAGTCACTAATACCCGCCTTCGAAAATTATAGCAACTCTTCATCTAATTCAAATTCACAATGCAAATATTGCCAAGCCAAACTGTTGAGAGACTCACACTCACTTATTTGTATTTACTGCGGTAATTTCCAAAAACATGATGATGGTGTTCATCCTGCTCCTATTAATTTTAATTCTACTGTTGGCTATACTTGGTTACTTCAATCCTTGTACTTCAATGGATCGGAAAGAGTTGGGTCTCTGGCTGAAGTAAGTGGAATAAATGGAGCACAAAGTCCTGCAGAAGATGAGTTATCTTTGTCCGAGCTTCTAGATCTGCAGATCTCATGGCGGGATGAGCCTAAGAAACCTGATAGTAATCTTAAAATCATGACCTCTGAGAGTTCTATGAATCTTGGTTCTGCTGACCTGGACTTCTTTATAGAGTCCAAGAGAGATATTGTGTCTAATGTATCCGAAGAACAACCAGTTGCCAGCACAAATGATCAAAATAAGGCCTTTGAAGGTCAAGCAAATCGTACATATGTAACTTCCACCATTGATCCGACTGATGATGCTTCAGCTGATTGGAATGCAGAATTTCAATTTGCAGATACCAAAATGGTGAATGAGAACCCCAAATCAGTTGACCTTTTTGTAGGTGCTGAACCTGATCTATCTTTGCGCGTAGATGCAGGTTTTGGGGAGATCAAAAGGTTCAATAACAAAGCACCAAATGACGAATCAGACCCATTTCCTTCTATGGGTAAAGATACTACTCAAGATGATCTTTTTGCCAACATGAGCTCTGCAACTTTTCAGCAGACTGAGCAGTTGGATTCAGTTCAAACCAATGATGGGTTATCGGGTCATCTAAGTGACGATAATTCGAAAGGTGTGGATGGAGACTGGTTTAGTGATGATAATTGGCAGAAAAGTGGTATCAACAGCACTTCTGTCTCTAATCAGGCTGATCAGTTAGACTTATATGCCCAGCCAAATGATAGATCGTCACAGGATAATCCAAATGATTCATCAGCAGATTGGTTTGAAAATACTAACTGGCAGAACAGCAGTGCCAACACCACTGCTGTCTCTCAGCAGGCCGATCAGTTAGACTTGTTTGACAAACTAAATGATGGATCTTCACATGATAATCCAAATGATTCATCGACAGATTGGTTTGAAAATACTGACTGGCAAAAAAGTACTGTCACTGCTGTCTCTCAGCAAACTGATAAGTTAGAGTTGGTTGGCAAAGTTAATGATGGATATTCACCAGATCATTCAAATGATTTATCGACAGATTGGTTTGAAAATACTGACTGGCAGAAAAGTACCCCTAACAGTACTGCTGTTTCTCAGCAGGCTGATCAGTTAGACTTTGTTGGCAAACTAAATGATGGATCTTCACAAGATATTCCAAATGATTCATCGCTAGATTTGTTTGAAAATACTAGCTGGCAGAAAAGTACCTCCAAGAACACGGCTCCCATTAATGATAATCATTTATTTTATATTGAACCACAGAATGATCAAGTCTCATCCCCATCATTGGTTAATGACTTGATTCGCTCTGAAAATTCGGATATTGATAATTTAAACAAACACCGTTCTGAAGCTACTACTGATTGGTTTAAAGATAGTCACTGGCCCATGGGTGCTTCAAGTTCTACTTCCAATATGGTGGCCAACAAAGATGACGATGATGGGTTTGATGAATGGAATGATTTCACAAGCTCAACTGGTAACCTAGATTTGAAACAAAGTAGTAATGAGAAAGTTGATGCCGCCGATAATATGCCTGAATTAAGTTTGTTTCCTTCATCCACTGCTGATCCACAATTGAATATTGAAGATACGGTGGCCAACAAAGATGGTGATGATGGGTTTGATGAATGGAATAATTTTACAAGCTCTAATCAAGATTCCTTCCCTGATTTTCAGAAACATATTAGTAATGAGAAAGTTGGCGATACCGAGAAGATGTCAGAGTTAAATTTGTTTCCATCTACAGCTGATCCAAAAGATGATTTTGGTGGCTTCTTCCAGTCGGAACTTTTTTCTGGTTCATCTAGTGACAAAAATCAAAATGATACTCAAGCAGTGTATGATATTTTTTCAGAAGTATCTACTACAAGCAGGACTGCTGACGCTGAAGCTGAAAATAGTGTTGAGGGATCAAAGAATGACGAAATTACTCCAAGTTCGACCAAAATTCCAAAGGCTGACGTACAAATGCTGTTGTCACAGATGCATGACCTGTCATTTATGCTCAAGAGTGAGCTTTCAATCCCCTCTAAGCCAGATGATTTGGATCCTTCTCACAGTAAATGA 2442 39.52 MDYGDHIPTDLITKSQIGFRELAGLSSFNPTLQASSLPTTTIESLIPAFENYSNSSSNSNSQCKYCQAKLLRDSHSLICIYCGNFQKHDDGVHPAPINFNSTVGYTWLLQSLYFNGSERVGSLAEVSGINGAQSPAEDELSLSELLDLQISWRDEPKKPDSNLKIMTSESSMNLGSADLDFFIESKRDIVSNVSEEQPVASTNDQNKAFEGQANRTYVTSTIDPTDDASADWNAEFQFADTKMVNENPKSVDLFVGAEPDLSLRVDAGFGEIKRFNNKAPNDESDPFPSMGKDTTQDDLFANMSSATFQQTEQLDSVQTNDGLSGHLSDDNSKGVDGDWFSDDNWQKSGINSTSVSNQADQLDLYAQPNDRSSQDNPNDSSADWFENTNWQNSSANTTAVSQQADQLDLFDKLNDGSSHDNPNDSSTDWFENTDWQKSTVTAVSQQTDKLELVGKVNDGYSPDHSNDLSTDWFENTDWQKSTPNSTAVSQQADQLDFVGKLNDGSSQDIPNDSSLDLFENTSWQKSTSKNTAPINDNHLFYIEPQNDQVSSPSLVNDLIRSENSDIDNLNKHRSEATTDWFKDSHWPMGASSSTSNMVANKDDDDGFDEWNDFTSSTGNLDLKQSSNEKVDAADNMPELSLFPSSTADPQLNIEDTVANKDGDDGFDEWNNFTSSNQDSFPDFQKHISNEKVGDTEKMSELNLFPSTADPKDDFGGFFQSELFSGSSSDKNQNDTQAVYDIFSEVSTTSRTADAEAENSVEGSKNDEITPSSTKIPKADVQMLLSQMHDLSFMLKSELSIPSKPDDLDPSHSK 813
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g02892 813 MobiDBLite consensus disorder prediction 312 340 - -
Soca5g02892 813 MobiDBLite consensus disorder prediction 367 388 - -
Soca5g02892 813 MobiDBLite consensus disorder prediction 411 431 - -
Soca5g02892 813 MobiDBLite consensus disorder prediction 275 297 - -
Soca5g02892 813 MobiDBLite consensus disorder prediction 746 774 - -
Soca5g02892 813 MobiDBLite consensus disorder prediction 312 327 - -
Soca5g02892 813 PANTHER DENTIN SIALOPHOSPHOPROTEIN-RELATED 7 415 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g02892 - -