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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g02915 ATGAACCGCCGCATCCGCCACCGATCGTCCACCACCATCGCTGCCGACAGCTACCTCCGCTACCTAAAACCCGGCGCTCTCGCTAAACTTCGAGACTCCAAAATCAAACACCGATCATCACCTTCCGATTCTCAGATCTATCTCACTCGCATTCTATCTTCACCATCCGCGGCTTCTTTATCGCCGTCGAGATCTCCGTCCATCGCTCAACAGGAAGTCGCAGGAGCAATCGCCGCCGTTGACGCCGGATCTCCTTGTTTCGCGGTTAGGTTTTACGGTCCGAGATATCCGCAGCGGAAGAAGCTTATGGCTGCTAGATCTATGTTTTTTCTAAACCCTAACCCCAGCGTTCCGGATGGTGCTGAGCCTGTTATTGATCCTTTTGCTAATGATTTTGTAGTAGCTCATTGA 411 51.82 MNRRIRHRSSTTIAADSYLRYLKPGALAKLRDSKIKHRSSPSDSQIYLTRILSSPSAASLSPSRSPSIAQQEVAGAIAAVDAGSPCFAVRFYGPRYPQRKKLMAARSMFFLNPNPSVPDGAEPVIDPFANDFVVAH 136
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g02915 136 PANTHER OS06G0679600 PROTEIN 1 136 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g02915 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Soca Soca-Chr2:81274986 Soca5g02915 Soca-Chr5:32509316 dispersed
Soca Soca-Chr5:32509316 Soca2g04126 Soca-Chr2:80698860 transposed