Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02970	ATGGTGGCTGCTTCATCTTCTTCACTTGATCTCCGATCCTTATATTTCACCAAACCCATAAACAATCCTTCAATCCAAACAAAACCCACATCCCAAATCTCCTTAAAACCCTTAAAGTCCAAAACTTTAAGCATCAAATCAATCCTATCACAAACCCCACAAAAGACCCAGAAATTTAACCATTGTTTTACCAAGAAAGATGATGGCTTTTTGTACGTTGAAGGACTTAAAGTCCAAGAAATCATGGAAAGTGTTGAAGAAAAGAGGCCTTTTTATCTTTATAGTAAACCCCAAATTACAAGAAATGTTGAGGCTTATAAAGATGCTCTTGAGGGTTTGAATGATTCCATTATTGGTTATGCTATTAAAGCTAATAATAATTTTTTGGTTTTGAAACATTTGAGAAGTTTGGGATGTGGGGCTGTTTTGGTTAGTGGGAATGAACTTAGGTTGGCACTTCAAGCTGGTTTTGATCCTACAAGGTGTATTTTTAATGGAAATGGGAAGCTTTTGGATGATCTTGTTCTTGCTGCTCAAGAAGGTGTATTTGTTAACATAGATAGTGAATTTGATTTGGATAACATTGTATCGGCTGCTAGAATTGCTGGAAAGAAGGTTAATGTACTGCTTCGGATCAATCCGGATGTTGACCCTCAGGTCCATCCTTATGTTGCAACTGGGAATAAGAACTCCAAATTTGGTATTAGAAACGAGAAGTTGCAATGGTTTTTAGATGCCGTGAAGTCTTATCCCGATGAACTAAAGCTAGTTGGGGCTCATTGCCATCTTGGGTCCACCATTACCAAGGAAAAAAGGTGTAACCATGGGTCAATGGAAACGGATTGA	846	37.83	MVAASSSSLDLRSLYFTKPINNPSIQTKPTSQISLKPLKSKTLSIKSILSQTPQKTQKFNHCFTKKDDGFLYVEGLKVQEIMESVEEKRPFYLYSKPQITRNVEAYKDALEGLNDSIIGYAIKANNNFLVLKHLRSLGCGAVLVSGNELRLALQAGFDPTRCIFNGNGKLLDDLVLAAQEGVFVNIDSEFDLDNIVSAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKSYPDELKLVGAHCHLGSTITKEKRCNHGSMETD	281

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02970	281	SUPERFAMILY	PLP-binding barrel	89	269	IPR029066	-
	Soca5g02970	281	ProSitePatterns	Orn-DAP-Arg decarboxylases family 2 pyridoxal-P attachment site.	120	138	IPR022653	-
	Soca5g02970	281	PRINTS	Ornithine-diaminopimelate-arginine (ODA) decarboxylase family signature	253	266	IPR000183	GO:0003824(InterPro)
	Soca5g02970	281	PRINTS	Ornithine-diaminopimelate-arginine (ODA) decarboxylase family signature	140	152	IPR000183	GO:0003824(InterPro)
	Soca5g02970	281	PRINTS	Ornithine-diaminopimelate-arginine (ODA) decarboxylase family signature	120	138	IPR000183	GO:0003824(InterPro)
	Soca5g02970	281	PRINTS	Diaminopimelate decarboxylase signature	226	235	IPR002986	GO:0008836(InterPro)\|GO:0009089(InterPro)
	Soca5g02970	281	PRINTS	Diaminopimelate decarboxylase signature	138	155	IPR002986	GO:0008836(InterPro)\|GO:0009089(InterPro)
	Soca5g02970	281	FunFam	Diaminopimelate decarboxylase	96	276	-	-
	Soca5g02970	281	Pfam	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	98	270	IPR022644	GO:0003824(InterPro)
	Soca5g02970	281	Gene3D	Alanine racemase	96	278	IPR029066	-
	Soca5g02970	281	PANTHER	DIAMINOPIMELATE DECARBOXYLASE	54	270	-	GO:0008836(PANTHER)\|GO:0009089(PANTHER)\|GO:0009507(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02970	-	-