Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02998	ATGGAAGAAAAACTAATACAAAGATTAGAGGCAGCCGTAGTGCGGCTGGAATCGCTTTCTGGCGGTCCTTCTCAGCCACATTCTGTCACAGGATCATCAGCCTCATCTGATCCATCCATTATTGCATTTGATGATCTGATGACAGAATACGTGGGAAAAGTTTCCGCTGCAGCCGAGAAGATTGGTGGACAAGTTAAGGATGTTACGAATGTTCTTGCTGCAGCTTTTGCCTCTCAGAAAGATCTTCTTGTTAAGATCAAACAAACTCAGAAACCTGATGCAGGTGGATTGGCCGAATTTCTGAGGCCATTAAACGATAAGTTAACGGAAGCAAATAGCATGAGTGAAGGACGGCGTTCTGATTTCTTCAACCACTTAAAAGCTGCTGCTGAGAGTCTAACAGCTTTAGCATGGATTGCATATACAGGGAAAAACTGCGGAATGAGCATGCCTATTGGACATGTTGAAGAATGTTGGCAGTCAGCTGAATTTTACAGCAACAAGGTTCTTGTAGAATATAAAAATAAAGATCAAGATCACGTAGAATGGGCCAAAGCTCTGAAGGAACTATATGTACCAGGGTTGAGGGATTACGTGAAGACTCACTATCCTTTGGGACCGGTATGGAGTGCAACCAGAGCTACTGTATCGGCTCCAGCCAATTCTTCTAATCCAGGTGCTCCTGCTGCCCCAAATCCTCCACCAGCTTCACTTTCAAACTCAGGGGCTTCTTCATCTTCTTCTTCCGGCTCAAAGCAAGGAATGGCTGCTGTTTTTCAGGAAATTAGCTCAAAGCCTGTGACTGCTGGATTGAAAAAAGTTACAGATGATATGAAGACCAAAAACAGAAAAGATAGGGCAGGGTTTGTCAGTTCTGGTGAAAAAGAAGTCCGCAAGAGCGTGCCAAATGTTGCAAAAGTTGGCTCTCCAAAGTTTGAGCTTGCTATGGGCCGGAAATGGGTCGTTGAGTATCAAATTGGAGTTAAGGATTTGGCTATTGATGAGTGTGACCCAAGGCAGACAGTTTATATCTTTGGCTGCAAAGATTCAGTCCTGCAGATCAAAGGAAAAGTTAACAACATAACTGTCGACAAATGCACAAAAATGGGTGTTGTGTTCACGGATGTTGTTGCTGCTTTTGAGGTTGTTAATTGCAACAGTGTTGAGGTGCAATGCCAGGGTGCAGCCCCTACCATTTCAATTGACAACACATCAGGTTGCCAGTTATTTTTGAGCAAAGATTCTCTAGATTCTTCGATAACAACTGCCAAGGCCAGTGAAGTCAATGTAATGGTACCTGCAAAAGATCCTAATGGTGATCTGGAGGAGCATGCTTTGCCACAGCAATATATTCACACTTATCAGGATGGCAACTTTGTTACAAACCCGGTCTCCCACTCTGGAGGGTAA	1410	43.83	MEEKLIQRLEAAVVRLESLSGGPSQPHSVTGSSASSDPSIIAFDDLMTEYVGKVSAAAEKIGGQVKDVTNVLAAAFASQKDLLVKIKQTQKPDAGGLAEFLRPLNDKLTEANSMSEGRRSDFFNHLKAAAESLTALAWIAYTGKNCGMSMPIGHVEECWQSAEFYSNKVLVEYKNKDQDHVEWAKALKELYVPGLRDYVKTHYPLGPVWSATRATVSAPANSSNPGAPAAPNPPPASLSNSGASSSSSSGSKQGMAAVFQEISSKPVTAGLKKVTDDMKTKNRKDRAGFVSSGEKEVRKSVPNVAKVGSPKFELAMGRKWVVEYQIGVKDLAIDECDPRQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVVFTDVVAAFEVVNCNSVEVQCQGAAPTISIDNTSGCQLFLSKDSLDSSITTAKASEVNVMVPAKDPNGDLEEHALPQQYIHTYQDGNFVTNPVSHSGG	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02998	469	MobiDBLite	consensus disorder prediction	217	251	-	-
	Soca5g02998	469	SUPERFAMILY	N-terminal domain of adenylylcyclase associated protein, CAP	40	234	IPR036222	-
	Soca5g02998	469	Gene3D	-	39	213	IPR036222	-
	Soca5g02998	469	Pfam	CAP N-terminal conserved motif	3	36	IPR013992	GO:0003779(InterPro)\|GO:0007010(InterPro)
	Soca5g02998	469	ProSiteProfiles	C-CAP-cofactor C-like domain profile.	309	446	IPR017901	-
	Soca5g02998	469	PANTHER	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	2	467	IPR001837	GO:0003779(InterPro)\|GO:0003779(PANTHER)\|GO:0005737(PANTHER)\|GO:0007010(InterPro)\|GO:0007015(PANTHER)\|GO:0008179(PANTHER)\|GO:0019933(PANTHER)
	Soca5g02998	469	SMART	carp	385	422	IPR006599	-
	Soca5g02998	469	SMART	carp	347	384	IPR006599	-
	Soca5g02998	469	ProSitePatterns	CAP protein signature 1.	5	17	IPR018106	-
	Soca5g02998	469	Gene3D	-	309	468	IPR016098	-
	Soca5g02998	469	SUPERFAMILY	C-terminal domain of adenylylcyclase associated protein	310	468	IPR036223	-
	Soca5g02998	469	MobiDBLite	consensus disorder prediction	236	251	-	-
	Soca5g02998	469	FunFam	Adenylyl cyclase-associated protein	39	214	-	-
	Soca5g02998	469	Pfam	CAP, N-terminal domain	43	205	IPR053950	-
	Soca5g02998	469	FunFam	Adenylyl cyclase-associated protein	308	468	-	-
	Soca5g02998	469	Pfam	Adenylate cyclase associated (CAP) C terminal	309	466	IPR013912	GO:0003779(InterPro)\|GO:0007010(InterPro)
	Soca5g02998	469	MobiDBLite	consensus disorder prediction	273	293	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02998	K17261	adenylyl cyclase-associated protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:33526862	Soca5g03000	Soca-Chr5:33526862	dispersed
	Soca	Soca-Chr5:33526862	Soca5g02999	Soca-Chr5:33526862	tandem
	Soca	Soca-Chr5:33526862	Soca9g01362	Soca-Chr9:15123859	wgd