Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g03016 | ATGGGAGGTCATGTTAGCAAAAGATCTGCAGCTTCTACTGCTGCTGCTACGTCTTCGGGTTTGCCTTCGATGTCTTTGAAAGATACCCATCAGATAATATCGGAGTTAAATGTGTATGAGGCCGCGTGTAGATCAGATACGGATTTGCAGTCGTTTGATGCGATGTTACAAGCTAGGGCTAATAATGTGATCAATACTTTGGCCGTGGGAGTTGAGGTTCGGGCATTGTTGTTTGACACGTTGAAGGAAGTTACGGAATGTTTGTTGGAAATGAATCAAGAAGTTGTGAAGGTGATATTGCATTGTAAGAAAGATATTTGGAAGAATCAAGAATTGTTTGAATTGGTGGAGGAGTATTTCGAGAATAGTCTACAAACGCTAGATTTCTGTGCTGCATTGGACAAGTGTTTGAAGAGAGTGAGAGATAGTCAGTTGTTGATTCTTGTAGCTTTGCAGCATTTTGATGAGGATGAAGGTGGAGAGGATGATAAGTATGAAAAGACGCTCGAGGATTTGAAGCATTTTAAGGATGCTGGTGATCCGTTCACTGAGGAATTCTTCACGATTTTTCATTCTGTGTATCGGCAGCAAATGCTGATGCTTGATAAGTTACAAGCTAAGAAAATGAAGTTGGATAAGAAAGTTAAGTATATTCAAACGTGGAGGAAAGTGTCGTCTGTTATCTTTGTGGCTACTTTTGCAGCGGTGTTGATATGTTCTGTGGTGGCGGCTGCTATCGCTGCACCGGCTGTGGCTGCTGCTCTTGCTGCCGCATCTGCTGTCCCTCTTGGTTCAATGGGGAAGTGGATCAACTCCCTTTTAAAGAACTACGAGAATGCCATTAAAGGACAAAAGGAGATCATTAGCTCAATGCAGGTTGGGGGTTTTGTGGCAATCAGGGACCTTGATACAATTCGGGTTCTTGTTGATAGGCTTCAAATGGATATAGAGGAGATGATGAGGAAGGCTGATCATGCAATCGAGGGAGATGAAATGATGAAAATTGCAATCGAGGAAATAAAGATAAAGCTCAATTCGTTTATGAAGAATGTTGATGATTTAGGGTTGCAAGCAGATAATTGCAGCCGTGATGTTAGACGAGCTAGGACTGTCGTCCTGCAAAGGATCATTAAGCCGCCACATAATCAGTGA | 1152 | 42.36 | MGGHVSKRSAASTAAATSSGLPSMSLKDTHQIISELNVYEAACRSDTDLQSFDAMLQARANNVINTLAVGVEVRALLFDTLKEVTECLLEMNQEVVKVILHCKKDIWKNQELFELVEEYFENSLQTLDFCAALDKCLKRVRDSQLLILVALQHFDEDEGGEDDKYEKTLEDLKHFKDAGDPFTEEFFTIFHSVYRQQMLMLDKLQAKKMKLDKKVKYIQTWRKVSSVIFVATFAAVLICSVVAAAIAAPAVAAALAAASAVPLGSMGKWINSLLKNYENAIKGQKEIISSMQVGGFVAIRDLDTIRVLVDRLQMDIEEMMRKADHAIEGDEMMKIAIEEIKIKLNSFMKNVDDLGLQADNCSRDVRRARTVVLQRIIKPPHNQ | 383 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g03016 | 383 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Soca5g03016 | 383 | PANTHER | UPF0496 PROTEIN 3-RELATED | 23 | 378 | IPR007749 | - | |
| Soca5g03016 | 383 | Pfam | Protein of unknown function (DUF677) | 49 | 376 | IPR007749 | - | |
| Soca5g03016 | 383 | Coils | Coil | 302 | 322 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g03016 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr3:18767597 | Soca5g03016 | Soca-Chr5:33672428 | wgd | |
| Soca | Soca-Chr5:33672428 | Soca7g03125 | Soca-Chr7:58021438 | wgd |