Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g03018	ATGGAGCTTAGGTCCATTCAATCTCCAGTAGTCAGTAGCATTCCTACAACAAAAACATTCATTCAAAAACACCAAGTCATATGTTACAACCAACTTAGTATTTCTTTTGGTTCGAAAAGAACTGTTCAGTCGAACGTTGTCAAGCATCAACCTGTTCGGTTTGATGTTCGAGCCTCAGCAACAATCGGTGTGCAGCCTGCTGAAACCAAATCAAAAGATGGTGAAAAGGACGGAAATGTTATCTTTGTTTCTGGAGCAACCGGAAAAGTTGGTTCACGAACAGTAAGGGAGCTTTTGAAATTGGGATTTAATGTCCGAGCTGGTGTACGAAGTATTCAAAGAGCAGAATCTTTGGTGAAAAGCGTAGAGCAAATGAAACTTGATGATGCATTATCTGATGGAAGTCAGCCTATAGAGAAGCTTCAACTTGTGGAGTGTGACTTGGAGAAACCGGAGCAGATTAAGGGGGCATTGGGCAGTGCCTCAACCGTTATATGTTGCATTGGGGCGAGCGAAAAGGAGATATTTGATGTTACTGGACCGTACCGAATTGACTTCCTAGCAACAAAAAACCTTATTGATGCAGCTGCTGCTGCAAAGGCAAAACAGTTTATTTTGGTTACTTCTTTAGGAACAAACAAGTTCGGGTTTCCTGCTGCTGTATTAAATTTGTTTTGGGGAGTCCTATGCTGGAAAAGGAAGGCCGAAGAAGCACTGCTTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGAGGAATGGAGCGTCCTACGGATACTTTCAAGGAAACACATAATCTTACACTTGCTACAGAAGATACTTTATTTGGTGGTCTTGTATCCAATCTTCAGGTGGCAGAACTCCTTGCCTTTATGGCCAAAAACCCCACTCTCTCATATTGTAAAGTAGTGGAAGTAGTTGCAGAAACGACAGCACCATTGACCCCCATGGGTGATCTCCTAGCAAAAATACCACCTCAACGTGCTGTACCTTCCCCGCCCAAGGAACCAGAAGCTCCCAAAGAACCAGAAGCCAGCAAAGAACCCGAGCCTGTTTCTAAGACTGTTAGCATTGCCACAGAAACACAATCGGAGTCAAAACCAGCTTCAACAAGGCCACTCTCCCCATATACTATGTATGAAGGTCTGAAACCCCCTGTATCCCCTATTCCGACAGCACCTGGCAGCAGTAAGGTGGTAGTTGAAGCAGCATCAGCCCCTACTGATACTGAAACTAGCATAAAGTCGGAAACCATAGTTATTACATCCGAACCTGCACCAGAGGCTACAGCATTGAAAACCAAACCTCTATCTCCTTATACCGCGTACGAAAACTTGAAGCCTCCAACGTCTCCCATTCCATCCACTCCTTAA	1374	44.4	MELRSIQSPVVSSIPTTKTFIQKHQVICYNQLSISFGSKRTVQSNVVKHQPVRFDVRASATIGVQPAETKSKDGEKDGNVIFVSGATGKVGSRTVRELLKLGFNVRAGVRSIQRAESLVKSVEQMKLDDALSDGSQPIEKLQLVECDLEKPEQIKGALGSASTVICCIGASEKEIFDVTGPYRIDFLATKNLIDAAAAAKAKQFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDTFKETHNLTLATEDTLFGGLVSNLQVAELLAFMAKNPTLSYCKVVEVVAETTAPLTPMGDLLAKIPPQRAVPSPPKEPEAPKEPEASKEPEPVSKTVSIATETQSESKPASTRPLSPYTMYEGLKPPVSPIPTAPGSSKVVVEAASAPTDTETSIKSETIVITSEPAPEATALKTKPLSPYTAYENLKPPTSPIPSTP	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g03018	457	CDD	SDR-a5	81	310	-	-
	Soca5g03018	457	MobiDBLite	consensus disorder prediction	324	394	-	-
	Soca5g03018	457	FunFam	Protein TIC 62, chloroplastic	77	327	-	-
	Soca5g03018	457	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	78	325	IPR036291	-
	Soca5g03018	457	MobiDBLite	consensus disorder prediction	353	373	-	-
	Soca5g03018	457	MobiDBLite	consensus disorder prediction	335	349	-	-
	Soca5g03018	457	Pfam	NAD(P)H-binding	85	296	IPR016040	-
	Soca5g03018	457	MobiDBLite	consensus disorder prediction	426	457	-	-
	Soca5g03018	457	Gene3D	-	79	325	-	-
	Soca5g03018	457	PANTHER	PROTEIN TIC 62, CHLOROPLASTIC	1	455	IPR044719	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g03018	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:33683857	Soca8g03599	Soca-Chr8:60197873	dispersed