Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g03026	ATGGTAGGAAAGAACTTCTTAAGGATGATGACGGATCAAAGTGCATCAGAAGCAGCAACAAAATTGATCAGCTCGGACTGGAATGAACTCGGAGATGTAACTAAGAAACTTGCAAATCATGTTATCACCCTTGGTTACAGTGGTGGTTTCATTACTACTATCCTTCAATATCGAACAAACTGGAGGACAAAGATGCTTACTACACTTCTTGTTCCTTATATCTTTTTGACGTTTCCTAACTGGCTTTTCCACATTTTAAGAGGAGATATCGGCAAATGGATCTCTTTCGTTGGAGTCATATTGCAATATATGATGTTGCCGGGTTCTTTGATCCTTCTGGTTGTGATAGCTCCAAGCTTGATCGCTAGTTATATCAGAGATGGGTGGATAGGGGTGTGTATTTGCCTTGCTATCGGATGCTATCTGCTCCAAGAACATATCAGAGCTTCTGGAGGTTTTAGGAATGCTTTCACAAAGGCAAATGGTATTTCAAATACTATTGGTATCGTGCTCTTGTTTGTGTTCCCAGTCTGGGCTTTGATCGGGTTCCTATGA	555	40.9	MVGKNFLRMMTDQSASEAATKLISSDWNELGDVTKKLANHVITLGYSGGFITTILQYRTNWRTKMLTTLLVPYIFLTFPNWLFHILRGDIGKWISFVGVILQYMMLPGSLILLVVIAPSLIASYIRDGWIGVCICLAIGCYLLQEHIRASGGFRNAFTKANGISNTIGIVLLFVFPVWALIGFL	184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g03026	184	PANTHER	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	12	180	IPR008892	GO:0016020(InterPro)
	Soca5g03026	184	Pfam	Cold acclimation protein WCOR413	16	172	IPR008892	GO:0016020(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g03026	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:33762176	Soca7g03145	Soca-Chr7:58345611	dispersed
	Soca	Soca-Chr5:33762176	Soca7g03144	Soca-Chr7:58345611	wgd