AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g03031 ATGGTTCTATCTATTTCGCTTCTATATTTCTATTCGAATCGGGTAATTCTGATTCTAGCAATGATTATGGCAATAGTGATCGCGGTTTATTCCTTAGATACCAACAACGTGTTTGATCCATGTTCAGATACAAAAGTTCTAAGATGGGATGGATTTACCTTTGGACTCGCATTTTCTTCAAAGGAATCCTTCTTCTCTAACCAAATTCAGCTTTCACCCTGCGATACTCGCCTCTCCCTCCATGGAACCAATGCTCAACTCGCTGTTTTTAGGCCAAAAGTCGACGAATTCACTTTTCTCACTGTGAATACCTCTGCATTTAGTGACATTAAACAATTTTCACAGGCAAAAGCTGGTGGATATATGGTTGCATTTGCAGGAAGACGATATGCAGCAAGATCAATGCCTACTTTAGTTGCGGATAAATCTAATATCATCACAAGTTTCACTTTGGTACTAGAATTCAAAGAAGGAAGACTTGTCAACTTATATTGGAAGAAATTTGGGTGTAAATCGTGTGCAGAGAGATCAGGTATTTGCGTCAACAATGAAGTATGTGCTACACCCGTTTCAAAGTGTAAGGCTAATGGTGGCTCGGTGGATTGTAGCATTATTAGTGTGCAACTAGCGTTTTCGGGTACAGACAAGATGTTAGAAGTTCTTAATTCGTGGTATGAGGTCGAAAACCTTAGGCAATATTCGCTAGTTGGTTTGTACGAAGACATCAATGGCTTAATTGGTTAA 744 39.25 MVLSISLLYFYSNRVILILAMIMAIVIAVYSLDTNNVFDPCSDTKVLRWDGFTFGLAFSSKESFFSNQIQLSPCDTRLSLHGTNAQLAVFRPKVDEFTFLTVNTSAFSDIKQFSQAKAGGYMVAFAGRRYAARSMPTLVADKSNIITSFTLVLEFKEGRLVNLYWKKFGCKSCAERSGICVNNEVCATPVSKCKANGGSVDCSIISVQLAFSGTDKMLEVLNSWYEVENLRQYSLVGLYEDINGLIG 247
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g03031 247 PANTHER DPH3 HOMOLOG-RELATED 22 241 - GO:0005829(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g03031 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Soca Soca-Chr1:7818180 Soca5g03031 Soca-Chr5:33830661 dispersed
Soca Soca-Chr1:8566460 Soca5g03031 Soca-Chr5:33830661 dispersed
Soca Soca-Chr5:33830661 Soca8g01033 Soca-Chr8:13551287 transposed