Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g03032	ATGAAAACGTTCCAAGATCTTATCGAAGAAGCAAAACTTCGTACTGTTTGGTGGGGGCTTTGTATTTTCATCGTTACTTATTTCTTAACTCACACAAGTGAATCAATGTGGATGAATGTACCTATAGCAATACTTTTGGTATCGGGGATTCATATTCTGTTAACAGAAGTCGATTTTCGATGGAAGAACAAGAAACCATTCCGACAGTCATATTTGTCACACCTAGAGAAGAAACAAATGTCTGTTAATGATTCTAGGCTTTCGACATTGCCTCCTCCGCCTAAATGGAAGAGAAAGATTGATTCTCCAATAGTCGAGGCTGCTTTGGATGATTTTGTTAACAAACTTTTACAAGAGTTTGTTGTTGATATGTGGTATTCAGACATAACGCCTGATAAGGAAGCGCCAAAGTTGCTTCACACGATTATTATGGATATTCTTGCTGAGATTTCGATTAGAGCAAAAGATATAAACCTTGTTGACTTGCTTACGAGAGATGTAGTTGATCTAGTAGGAGATCACTTGGAGCTTTTTAGGAAAAACCACATCGCTATTGGACGGGAGGTTATGGTGACATTGTCTTCTGAAGAGCGAGATGAACGGTTGAAACATCATCTTATGGCTTCTAAGGAGCTTCATCCAGCTCTGATATCTCCAGAGAGCGAGTACAAGTTTCTTAAGCGGATTATGGGAGCGCTTTTGGCTGCGGTACTAAGACCACGAGAAGCTCAATGCCCATTAGTTCGATGTATTGCACGTGAGCTCTTAACATGCACAGTAATGGAACCTGTAATGAGATTTGCAAGCCCTGGGCAAGTTAATGAGTTGATTGAGGCTATTTTCTTAGCCAAAAATAACAAGGGAGATAATGAGGCAAGTAATGATCAGTCATCTAATGTCACGGGTCAAATTCAGAATCAGCCCGCCGCTGCAAACAATGTAAATAGTGTAGAGTCCGCTTCCATAAAAGCAGGCTCTTCTAGTGGTCAAAAGAGTGATGATAAGACACAAACTACACCTGATGACCAAAAGAAAGCAATTTTAAATCCACCTGGGACCATTGTTGGTGATCTGGTTCAAGATGAATCTGTGCAGCCACCGTCATCTGCTTGGGCTCGAGTTCTTGAGGCTGCAACCCAAAGAAGGACAGAAGTTCTTCAGCCAGAAAATCTTGAAAATATGTGGACCAAAGGAAGAAACTATAAAAAGAAAGCTCAGAAGAAAGGTGCTTCAGAACAAAACAGTGGTATTAATGAAAATTCAAACGATCAACAAAGAGAGCAAAATCTTGATGGTGGAATTTTATGCGATCAAAGCAAGACATCAGGCCCTTCTGACACAGTTGATGAAAATTCTAATAGTAATGCTACATTAGAAAGATCAAGTAGTGCTTCATATTTAAACAACAAGACTCAAACCGAACCTTCAGGTGCAATCCAAGTTAGTGGATTGGTTATCCCAGAGTTTTATAACGCGAATGTTGTCAGTGATAATGATGTACGTAATGCTAATACAGTTTCTGATAAAGTAACACGTACCGAAGGATATGTTCCAAAGCTGAGGTGTCGGGTTCTTGGAGCATACTTTGAAAATCTTGATTCAAATCCATTTGCAGTGTATTCGATTGCAGTAACGGATGTGGATAACAAGACTTTGTTTGTGAAAAGAAGATATAGGAATTTTGAGAGATTGCACCGCCATCTTAAGGATATTCCTAATTATACATTACATTTGCCTCCTAAAAGGATATTCTCATCTAGCACAGAGGATGCATTCGTTCATCAACGTTGTATACAGCTTGATAAATATCTTCAAGATCTTTTGTCTATAGCTAATATCGCTGAGCAACACGAAGTATGGGACTTCTTGAGCATGTCTTCTAAGAGTTATTCTTTTGGAAGGTCATCATCGGTGGTGAAAACTTTAGCAGTCAATGTGGATGATGCTGTGGATGATATTGTGCGTCAATTCAAAGGAGTTTCAGGTGGTTTAAAGCGGAAAGTTGTTGCCCCGGGTTCTCCATCCGAAGCTTCTGCATTATTCACTAATAAAAATGTTTCTCAAAAATCTGACGAAGCAATTGGTTCAATGACCAAACAAACTACCTCAGGTAGCGCTAATAGTTTTTCCGACTATGAAGGAAGTGATAAAGATGGAACACTTCACCTTGAGGACTCAGAGTCTGCTAATGAGCAGAATCTGGATAATGATTTGAAGTCGAAAGAGGATAAAAGCTTGGAGTTGGATAAGAAAATGAGTTCAGAGGATCGGTCTGAAATACTTAGCCTGGCTGCAAACTTTACATCAACTTCTGGTCTCAAGGAAGATCCTCTTGGTGTGCCAGCAGAGTGGGCACCGCCTAATGTAAGTGTTCCGTTGCTAAACTTAGTGGACAAGATATTTCAACTCAAGAGAAGAGGATGGTTAAGACGACAAGTGTTTTGGATATCAAAGCAAATTTTGCAGCTAATGATGGAAGATGCTATTGATGATTGGTTGTTAAGGCAAATTCATTGGCTCAGAAGAGATAATGTGGTTGCTCAAGGAATTCATTGGATACAAGATATTCTATGGCCCGAAGGCACATTCTTTCTGAAACTAAGGGCGAGTCAAACAGATTCTTTTCAGTCAAACGATGGATCCTTGCAGAACCAATCTGGTAGTAAAAATAATAAACAAGGGTCCTTTGAGGAACAGCTTGAGGCTGCTCGTAGAGCTAGCGATATAAAAAAGATGATCTTCAAGGGAGCACCAACTACATTGGTTAGCTTAATCGGACATAAGCAATACAAACGTTGCGCTAAAGATGTATATTACTTTCTCCAGTCGGCTGTGTGTTTGAAGCAACTTGGATATGGTTTACTAGAACTTGCACTCATTACAGTGTTCCCGGAGCTGCAAGACATTATATTAGATGTTCATGAGAAGAAAAAAGACCAAAAGGTGTAG	2949	39.71	MKTFQDLIEEAKLRTVWWGLCIFIVTYFLTHTSESMWMNVPIAILLVSGIHILLTEVDFRWKNKKPFRQSYLSHLEKKQMSVNDSRLSTLPPPPKWKRKIDSPIVEAALDDFVNKLLQEFVVDMWYSDITPDKEAPKLLHTIIMDILAEISIRAKDINLVDLLTRDVVDLVGDHLELFRKNHIAIGREVMVTLSSEERDERLKHHLMASKELHPALISPESEYKFLKRIMGALLAAVLRPREAQCPLVRCIARELLTCTVMEPVMRFASPGQVNELIEAIFLAKNNKGDNEASNDQSSNVTGQIQNQPAAANNVNSVESASIKAGSSSGQKSDDKTQTTPDDQKKAILNPPGTIVGDLVQDESVQPPSSAWARVLEAATQRRTEVLQPENLENMWTKGRNYKKKAQKKGASEQNSGINENSNDQQREQNLDGGILCDQSKTSGPSDTVDENSNSNATLERSSSASYLNNKTQTEPSGAIQVSGLVIPEFYNANVVSDNDVRNANTVSDKVTRTEGYVPKLRCRVLGAYFENLDSNPFAVYSIAVTDVDNKTLFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANIAEQHEVWDFLSMSSKSYSFGRSSSVVKTLAVNVDDAVDDIVRQFKGVSGGLKRKVVAPGSPSEASALFTNKNVSQKSDEAIGSMTKQTTSGSANSFSDYEGSDKDGTLHLEDSESANEQNLDNDLKSKEDKSLELDKKMSSEDRSEILSLAANFTSTSGLKEDPLGVPAEWAPPNVSVPLLNLVDKIFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIHWLRRDNVVAQGIHWIQDILWPEGTFFLKLRASQTDSFQSNDGSLQNQSGSKNNKQGSFEEQLEAARRASDIKKMIFKGAPTTLVSLIGHKQYKRCAKDVYYFLQSAVCLKQLGYGLLELALITVFPELQDIILDVHEKKKDQKV	982

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g03032	982	Pfam	PX domain	548	624	IPR001683	GO:0035091(InterPro)
	Soca5g03032	982	PANTHER	PX SERINE-THREONINE KINASE PXK	3	978	IPR051837	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	308	358	-	-
	Soca5g03032	982	ProSiteProfiles	PX domain profile.	518	630	IPR001683	GO:0035091(InterPro)
	Soca5g03032	982	ProSiteProfiles	PXA domain profile.	102	285	IPR003114	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	876	897	-	-
	Soca5g03032	982	CDD	PX-SNX19-like-plant	520	624	-	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	388	473	-	-
	Soca5g03032	982	Pfam	Sorting nexin C terminal	808	943	IPR013937	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	308	334	-	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	690	753	-	-
	Soca5g03032	982	SMART	PX-2	516	626	IPR001683	GO:0035091(InterPro)
	Soca5g03032	982	Pfam	PXA domain	102	279	IPR003114	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	690	714	-	-
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	410	473	-	-
	Soca5g03032	982	Gene3D	-	522	634	IPR036871	GO:0035091(InterPro)
	Soca5g03032	982	MobiDBLite	consensus disorder prediction	715	753	-	-
	Soca5g03032	982	SMART	PXA-3	102	285	IPR003114	-
	Soca5g03032	982	SUPERFAMILY	PX domain	520	627	IPR036871	GO:0035091(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g03032	K17925	sorting nexin-13

Event-related genes

Select	Gene_1	Gene_2	Event_name
	157148	Soca5g03032	Soca9g01399

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:33842591	Soca7g04846	Soca-Chr7:76786917	dispersed
	Soca	Soca-Chr5:33842591	Soca9g01399	Soca-Chr9:15555755	wgd