Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g03082	ATGGCAAATGCAGCATCATATTGTGGTTACTCCTTTTTATGTTCCCAATCTGTATTACGATCTTCTTCTTCTTCTTCATTGTTTCCTTCATCTAATGATAATATTAATATATCTTTCCGTACATCCAAACACAACAATAAATCCAACACTCTTCGTGTCCTCTCTATGATCCAACGCCCATCCAAAGTGGTGACAGCAAAGTCATGGAACACATCAGTTCTAGACAGCAAGATCCCAGTACTGGTCGAGTTCTATGCCAGTTGGTGTGGACCATGCCAAATGGTGCACCGTGTGATTGATGAAGTTGCAGCCGATTATGCTGGGAAGATCAAGTGTTTTGTGCTTAATGCTGACCAAGATCCACTAATCACAGAGGAATATGATATCAAAGCTGTGCCCATTGTGCTTTTATTCAAGAACGGTGAGAAATGTGAGTCAGTAGTTGGAACCATGCCTAAAGAATTTTACGTCGCTGCCATTGAAAGGGTCTTGTCATCTTCGTCGTGA	507	41.42	MANAASYCGYSFLCSQSVLRSSSSSSLFPSSNDNINISFRTSKHNNKSNTLRVLSMIQRPSKVVTAKSWNTSVLDSKIPVLVEFYASWCGPCQMVHRVIDEVAADYAGKIKCFVLNADQDPLITEEYDIKAVPIVLLFKNGEKCESVVGTMPKEFYVAAIERVLSSSS	168

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g03082	168	ProSitePatterns	Thioredoxin family active site.	81	99	IPR017937	-
	Soca5g03082	168	Gene3D	Glutaredoxin	62	167	-	-
	Soca5g03082	168	SUPERFAMILY	Thioredoxin-like	55	165	IPR036249	-
	Soca5g03082	168	ProSiteProfiles	Thioredoxin domain profile.	55	165	IPR013766	-
	Soca5g03082	168	Pfam	Thioredoxin	62	160	IPR013766	-
	Soca5g03082	168	CDD	TRX-family	72	161	-	-
	Soca5g03082	168	PRINTS	Thioredoxin family signature	88	97	-	-
	Soca5g03082	168	PRINTS	Thioredoxin family signature	80	88	-	-
	Soca5g03082	168	PRINTS	Thioredoxin family signature	128	139	-	-
	Soca5g03082	168	FunFam	Thioredoxin	56	167	-	-
	Soca5g03082	168	PANTHER	GEO12009P1	47	164	-	GO:0005737(PANTHER)\|GO:0015035(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g03082	K03671	thioredoxin

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:34441478	Soca7g00699	Soca-Chr7:13618340	dispersed
	Soca	Soca-Chr5:34441478	Soca5g03082	Soca-Chr5:34441478	tandem