AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g05081 ATGGGGGGGTTTGCTGCTGCTGCTGCTGCCGGTGGTTATGTAGGTTTTCCTCCTCCTCCTCCTCGTAATAATAATAATAATTTGGTGTCATGGAAATACAAATACTGCTGCTACGATGGGGTGGATGATTTCAAGATTCCCAAACCCCAACCCTTTATTTTCACACCCACACCCCCACTCCCACTCCCGCTTGTTGTTATTCGGAGGACCAAGGCCAAGGCCTCCTCTTCATCATCATCTGATTATTCCCATAACACTGAATTACCTTCTATTCATTTTGAAGAAGAAGAAGAAAGAAGTAGCCCTACTGAGGTGAAGAAGGAGATACAAATGTGCTATCACCTGATACGCACACTTGGTAGGGGAGTTGTTTACTTGGGTTCTGCAAGGATGGGCCCCGGCCATGAGCATTACATCCAAACACAACATTTGTCAACCCAGGTGGCAAAACTCTTGGGGTGCACTTCATGGTCAGGGGCTGGACCAGGCCTCATGGATGCTGCCAATCGAGGTGCTCTTCAAGCTGGGATGCCCGTTGGTGGATTCAAGATCGCTAAAGAGGCTAACCAATGGACATCTTCCAATTTTCATCCTTATCTTCCTTCCCACACTTACCTTACTTGCAGGTTTTTTTCTGCAAGAAAGCACGGGTTAGTAGATGCTGTGGTTAGAACTAGCGACCAGGATAAGACGGCCGTGATAGCTCTGCCAGGTGGGATTGGGACTCTAGATGAGGCTTTTGAGATTCTTGCATTGATCCAGTTAGAAAGAATAGGTTCAGCATTACCAGTTCCATTTATTTTGATGAACTATGACTCTTTTTATACAAAGCTTTTGGATTTTTTGGAGGTATGTGAAAATTGGGGGACCGTTTCCAAGGGAGAGGTTTCATCGCTTTGGAAAGTATGCAATAATAACTCGGAAGCGCTGGCGTATCTTGCAGAATTTTATGATCTTGATCATGCTAACCAACAGTAA 978 45.3 MGGFAAAAAAGGYVGFPPPPPRNNNNNLVSWKYKYCCYDGVDDFKIPKPQPFIFTPTPPLPLPLVVIRRTKAKASSSSSSDYSHNTELPSIHFEEEEERSSPTEVKKEIQMCYHLIRTLGRGVVYLGSARMGPGHEHYIQTQHLSTQVAKLLGCTSWSGAGPGLMDAANRGALQAGMPVGGFKIAKEANQWTSSNFHPYLPSHTYLTCRFFSARKHGLVDAVVRTSDQDKTAVIALPGGIGTLDEAFEILALIQLERIGSALPVPFILMNYDSFYTKLLDFLEVCENWGTVSKGEVSSLWKVCNNNSEALAYLAEFYDLDHANQQ 325
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g05081 325 MobiDBLite consensus disorder prediction 88 104 - -
Soca5g05081 325 SUPERFAMILY MCP-YpsA-like 107 313 - -
Soca5g05081 325 Gene3D - 101 325 - -
Soca5g05081 325 PANTHER EXPRESSED PROTEIN 97 320 - -
Soca5g05081 325 MobiDBLite consensus disorder prediction 76 104 - -
Soca5g05081 325 Pfam Possible lysine decarboxylase 165 312 IPR031100 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g05081 - -