Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05100	ATGAAGAGGGTGGGGGTGGGGGTGGTAGAGAAAGAAAGCATTCAAGTGATCGCACAAAGCATAGGGGTATCGAATATATCTGGGGAAGTATTGCCTGGTTTGGCTTCGGATATCGAATACCGAGTGCGGGAGATCATGCAAGAGGCTATCAAATGTATGCATCATTCTAAGCGTACTTGTTTGACTTCACTCGATGTTGATACTGCCCTCCAACTCAGAAAAATGGAGCCAATATATGTTGCGTCTTCCGCTAATTCTTCTTCATTGCAATTCAAAAGAGCTCCCCGGAGTAAGGATTTGTTTTACATCCAAGACAAGGATGTCGATTTTAGGGAGGTAATTGACGCCCCCCTTCCAAAAGCACCTCTGGATACCGCACTTGTCAATCACTGGCTTGCTATTGAAGGCGTTCAACCTGCCATCTCTCTTAATCCTCCACTTGAATTTCTTGTAACCCCGTTCGATAATAAGAAGCCTGATTCCAAAGAAGATGGGGTTTCTAATGACCTTAAACCTCCTTCCAAACATGTGCTCTCAATAGAACTCCAGCTTTACTTTGAAAAAATTACAGACCTTACCGTAAGTCGTTCAAACTCACCTATCTTTAGCAAAGCATTGTTGAGTTTGGCGACTGATGCAGGGCTTCATCCTTTGGTTCCTTATTTTATATATTTTGTTGCTGAAGAGGTCACTCGCAACCTAAGCAATTTTCATCTTTTGTTTGCTTTAATGCGCCTTGTTCGGAGTCTTCTACAGAACCCATTTCTGCATATTGAACCTTATCTGCACCAACTGATGCCATCTGTAATGACCTGTCTTGTTGCAAAAAGCCTGGGGAATAAGTTAACTGATAACCACTGGGAACTTAGAAACTTCACAGCTAACGTAGTGGCTTTAATATGCGGGAGGTTTGGATATGGGTATCATAATCTTCAATTACGCGTGACTAGAACTCTTCTTCATGCTTTTATGGACCCAGCAAAAACGTTTCCCCAGCATTATGGTGCTATAAAAGGGATTACTTCCCTTGGATCAAGTGTGGTTCGTCTCCTTTTGCTACCAAATCTCGATCCATATCTACAATTTATAGAACCAGAAATGCACCCTGAGAAGCAAAAGAATGAGAGCAGAAGGCAGGAGGCTTGGAGAGTGCATGGTGCCTTAATGTGTGCAGCCGGTTTATGTATTTACAGTCAGCTTAAGATGATTCCCAATCTCTTATCTCCACCATCACATAGCATCTGGAAGAGGAATGGAAAATTCGGGACAGCAAATCCAAACAAACGGAAGTTGGGAGGCATGAACAACATGATGGATCAGTCACTTAAGAAAGTAGCAACAGCCGACGGTTCACATTTAGTGAAGGTAGAGATGCAAGGACCCAGCAGTGGGTTTTCAATAACTCATGGTGGCACAGATGCAGGGATGCACCAATTACCCAGGTTTTTGCCTAATGACAACATGGCAGGGAGCAGTGGCAGGAGGGACAAGTTTGGTGGTGCAACTCATTCATCAGTGGCTGTGTCCCGAGCATGGAAAAAGGAAATAAATGCAGGACATTTGCTTCCCAAACTCTATGACCTTTTTGGTCAAGGCATGTTTCCATTTGTACCTTCGCCGGAATTGTGTAATTTACACCTATGA	1644	43.43	MKRVGVGVVEKESIQVIAQSIGVSNISGEVLPGLASDIEYRVREIMQEAIKCMHHSKRTCLTSLDVDTALQLRKMEPIYVASSANSSSLQFKRAPRSKDLFYIQDKDVDFREVIDAPLPKAPLDTALVNHWLAIEGVQPAISLNPPLEFLVTPFDNKKPDSKEDGVSNDLKPPSKHVLSIELQLYFEKITDLTVSRSNSPIFSKALLSLATDAGLHPLVPYFIYFVAEEVTRNLSNFHLLFALMRLVRSLLQNPFLHIEPYLHQLMPSVMTCLVAKSLGNKLTDNHWELRNFTANVVALICGRFGYGYHNLQLRVTRTLLHAFMDPAKTFPQHYGAIKGITSLGSSVVRLLLLPNLDPYLQFIEPEMHPEKQKNESRRQEAWRVHGALMCAAGLCIYSQLKMIPNLLSPPSHSIWKRNGKFGTANPNKRKLGGMNNMMDQSLKKVATADGSHLVKVEMQGPSSGFSITHGGTDAGMHQLPRFLPNDNMAGSSGRRDKFGGATHSSVAVSRAWKKEINAGHLLPKLYDLFGQGMFPFVPSPELCNLHL	547

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05100	547	Gene3D	Histone, subunit A	6	72	IPR009072	GO:0046982(InterPro)
	Soca5g05100	547	Pfam	TAF6 C-terminal HEAT repeat domain	175	356	IPR011442	GO:0006367(InterPro)
	Soca5g05100	547	SUPERFAMILY	ARM repeat	183	396	IPR016024	-
	Soca5g05100	547	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	8	535	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(InterPro)\|GO:0005669(PANTHER)\|GO:0006367(InterPro)\|GO:0016251(PANTHER)\|GO:0016251(InterPro)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Soca5g05100	547	FunFam	Transcription initiation factor TFIID subunit 6	175	370	-	-
	Soca5g05100	547	SMART	TAF-cls	7	73	IPR004823	-
	Soca5g05100	547	Pfam	TATA box binding protein associated factor (TAF)	8	70	IPR004823	-
	Soca5g05100	547	CDD	TAF6C	175	391	IPR011442	GO:0006367(InterPro)
	Soca5g05100	547	Gene3D	-	174	378	IPR046344	GO:0006367(InterPro)
	Soca5g05100	547	SUPERFAMILY	Histone-fold	9	71	IPR009072	GO:0046982(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05100	K03131	transcription initiation factor TFIID subunit 6