Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05105	ATGGACCCCGAGAGCAGAGCAAGTCTTATACCAAAACAACGTAACAAGGATATATCTCGCACGAAATCCAGTGCTTACGATGAGCTACACAGTTTCAGGTCATGCCTCCAGTGGATGTGCGTTGATCAATCCACCGGTTACACCTTTTGCCTCTCTTGGTTAGTCTTCATCGTTTTCGCCATTGTCATCCCTATCCTCTCACATTTCTACCTCGCTTGTAGCGATTGTGATTATCGACATGCCAGGCCTTACGACGGCCTTGTTCAGTTGTCTCTCACCAGCATTGCCACACTTTCCTTTGTTTGTCTGTCACGGTTTGTAAGATTTTACGGGCTTCGTAGGTTTCTGTTTTTTGATAAGCTTTGTAATGAAAGTGAAACCGTACGCAGAGGCTATACCCAACAACTTGATAGCTCGCTTAAAATACTCTTCATATTTGTTGCACCGTGTTTTACGGCCGAGGCTGCATATAAGATCTGGTGGTACAGTTCGAGTGCCACATCCATTCCTTTCTTCGGTGACACAATAGTGAGTAACGTCTTTGCATGCACCTTTGAGCTCGCATCCTGGCTCTATAGAACCGTGGTGTTTTTCCTAGTTTGTGTCCTGTTCCGCCTTATCTGTCATCTTCAAATCCTCCGTCTTCAAGATTTTGCAAAGGTGTTCCGTGAAGACTCTGATGTCGAGTCTGTTTTGAGGGAACACCTTAGGATCAGGAGGCATCTGCGTATCATAAGTCACCGATGGCGTGTTTTTATACTGTGGGTTCTCATCCTTGTTACAGTGAGTCAATTTGTATCGCTTCTTGACACCACCCGATCCAATGCTGATCTCAGCATATTTAAAGCCGGTGAACTTGCATTGGTTTCTGTAAGTTTGCTTGCTGGGCTAATGATATTACTAAGGAGTGCCACGAGGATTACACACAAGGCTCAAGGGGTGACGTGTTTGGCTACAAAGTGGCATGTATGTGCAACCATCGAGTCCTTTGATCCACCAGATGTACTGGAAACTGAAACCCCACCGGTGGGTGTTGTGGGTAACCAAGTGTTCCGTGGCGAGGAATCATCATCATCTGACAACGAGGATGTTGGCAGTGAAGACGAGTTAGACAGCACTAAACTCATACCAGCCTTTGCTTACAGTACCATATCGTTCCAGAAAAGGCAAGCCTTAGTAACGTATTTTGAGAACAATGGAGCGGGGATAACAGTGTTTGGATTTGTGCTGGATAGGTCTTCAGTGCATACAATAGCCATGATAGAAATGTCATTGGTGTTGTGGTTGCTTGGAAAGACAATCGGTATCTCTTAA	1314	45.28	MDPESRASLIPKQRNKDISRTKSSAYDELHSFRSCLQWMCVDQSTGYTFCLSWLVFIVFAIVIPILSHFYLACSDCDYRHARPYDGLVQLSLTSIATLSFVCLSRFVRFYGLRRFLFFDKLCNESETVRRGYTQQLDSSLKILFIFVAPCFTAEAAYKIWWYSSSATSIPFFGDTIVSNVFACTFELASWLYRTVVFFLVCVLFRLICHLQILRLQDFAKVFREDSDVESVLREHLRIRRHLRIISHRWRVFILWVLILVTVSQFVSLLDTTRSNADLSIFKAGELALVSVSLLAGLMILLRSATRITHKAQGVTCLATKWHVCATIESFDPPDVLETETPPVGVVGNQVFRGEESSSSDNEDVGSEDELDSTKLIPAFAYSTISFQKRQALVTYFENNGAGITVFGFVLDRSSVHTIAMIEMSLVLWLLGKTIGIS	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05105	437	Pfam	Protein of unknown function (DUF3537)	27	421	IPR021924	-
	Soca5g05105	437	PANTHER	RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K	12	436	IPR021924	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05105	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155614	Soca2g04497	Soca5g05105

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr2:89322852	Soca5g05105	Soca-Chr5:69269587	dispersed
	Soca	Soca-Chr2:89322852	Soca5g05105	Soca-Chr5:69269587	dispersed
	Soca	Soca-Chr4:12650753	Soca5g05105	Soca-Chr5:69269587	dispersed
	Soca	Soca-Chr4:12650753	Soca5g05105	Soca-Chr5:69269587	dispersed
	Soca	Soca-Chr4:75839181	Soca5g05105	Soca-Chr5:69269587	dispersed
	Soca	Soca-Chr5:69269587	Soca8g03254	Soca-Chr8:54549003	dispersed
	Soca	Soca-Chr2:89291964	Soca5g05105	Soca-Chr5:69269587	wgd