Gene detail

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Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05114	ATGGAAAAAGATGCTACTTGGATACCTTTAACACCAGGAAAGCCTATTTCCGCTACGGTTGGATATAGTCATGAGTCGGCATTGACTTCTGGAAAAGGGATTATAAAGGAAATTATAAATGTAGCGTTTCCGTGTGTAGATTTATTTGATACTACTAGATATATGGAAAAGAGTGGAATGAATGAGACCGATAAGTTGCCAGCTAGCATTCTTGATGAACATGAAGCGGTTTTTGGTGCGGCTGTAACAGAACCTGAAAAGACAGCATTGGGTCAGGATGACACAAGCTGTGTACAAGAGGAGGCAGTAAAAGTTCCTTCAAGGTATGATGGTAAAAAGGTGGCGGATGGTTTTGATGAGTCACTTGGCTCAGTTCCAACTCCATCTAAGACAGAAGACACCAGAAAAAGGCGTAGTAATGGCATTGACTTGAACAAGAAGCCAAGTCAAAGACCCCGGGTGAAAAAACACAGACCTAAAATATTCGATGATAGCAAACCTAAAAAAGTCCCAAAGGCTCAAATTCCAAAGGGTTCGACCCCACGACCAAAAAAAACACAAAAGCCAGCAACTCCAAATCGGGTACAAGAAAAGCGGGCGAGCTCAAAACATAATAAAAATACAGGATTGACGGATTGTACGCAAAATTCTACGAGTCATGGACATGTAGATGGTGAGCAAGTTGTCCAAGAAGCTTCTAGGGATTCATTAAGTGTTGTTAAACCATGCAAGCGTTACTTGGATTTTGACTCTAATCTAGTTGTTCAAGAGTCACATAATGTGTCAAAAATACAAGAACCTGGGAGACCTTTTCTTAACCTTGAAATTTTTTATTGTCTTGGTAAGATTGTTACTTCCAAGAGAAATACACCAAGGAAGAGTAGATTTCCAAAGAAGAGTCATCAAGCTTCAGAGGATTCCTTGGGAAGTAATGACAAGCAGAAACATGAGCAAGATTTCTGCGATACAAGAGAACAAGCTTCAGAGAATTTGCTGGGAGGTAATGACAAGCAGAAACATGAGCAAGATTTTTGCATCACAAGAGAAGAAGAAGCCGGAAAAAGTAGTAGTAAATATGTGTACTTCTATCAACGCCGAAAGAAAATCAATTCAAAAGTAATAAGTTACACCCCTACAGTGCAAGTATATCGAAGGACGTTTCGAGAAAATAACTGTTTTCAAAGTAGTAAAAAGAGTGGACCCAATTTTCCAAAAATATTCAAGAAACGAAGGACGTTGAGAAAAAAAGCAAATATAGGTTGGTGGTGCATAGACCATGTTGAAGATGGGCATGGTAATGGGAAAAGATCACTTAGAAAGTGCATTCAAGCTACTGGAAAAAGGGTACAGATTAGTGTCGATAAATCCAAAGACCAAAAACGATCGGTGAAAAAGCCTGCCATCCTGAGAGGAGAATGGCTTAAAAGTATATTTTCACCTCCGAGAAGGAAGCGATCCATAAGGCACATTCGTAGGAGGGGAAATAACAAGGACTTTCTTAATTCTAGCAGAATGCCTTATGATGATGACACATACCTTAAATGTCAAGAGGAAAGTTCTCTTCAGAATACAGAGGGAAATTTTGATATAGACCTTAGATGTCAAGAGGAAAATTTTCTTCAGATTACAGACAGCCTCCCACTGCAAGATGATTTAGATATCAACAGGGAAGAGGAAAATTTTCTTCAGATTACAGACAGCATTCCACTGCATGAGGTTCCGGTCCATATGATTGAGAGTTTTACCTCACGGCACCACGATGTTCAACAAATTGATGATTTTGTATGTGGTCTAAACTGTTTTCAGTTACAGGAGGTTCCCATGAGTCAAAGTTTGGTACCCAGATATGTTGATACCGAAGAAGATAGAACTTCATGTGCACATTTATATGCACAAAACATGACTCCGTACTTGATAGCGAAATTTGCGAGTCTAGACATCAATGGCCAATGCAGGAAACCAGTGGCACGAGATCCAAATACTGGGAGAATAGCAAGTCTAGACACCAATGATCAGTGCAAGGAACTAGTGGTACGAGATGAAAAGGTCAGTGGGGCCATTGTGAAGGCAGCTCCTACCAAGAAGCGTAAAGTGCTTCCCAAGGTGGATCTTGACAACGAGACTTTGAGAGTTTGGAAACTGTTGATGGAGAATGATGGAAGTGAACAACTTGAAGAAATGGATAAAGACAAGGATGAATGGTGGGACAGACAGAGAGAAATATTTCGTGGACGTGTGGACTCATTTATTGCCAAAATGCATCTTATTCAAGGTGATAGGCGTTTCTCACCATGGAAGGGTTCAGTAGTTGACTCGGTGGCTGGTGTTTATTTAACTCAAAATGTGTCCGACCATCTTTCAAGCTCTGCTTTTATGTCTGTGGCTGCAAGATTTCCGGTCAAGCCCAGAAGTAAAGAAGCTGATGATTACTTTGGTGAAGTCGCAACTAGAAAAGAAACAGTCACATGTTATACAAAAGTTGATGAAGATCTCTGTAGGAATAATGAAATGGAACAAAATGTGATTACTTCATGTGCTGATGCAATTCCAACCACAGAACCTAAACAAGATGTTGTTTCAAATCCAATTCTGGCTCAAGATGGGCCGTATGCAAATGAGAATTCTAATACTTTCCGAAAGCTTCTAGAAGTTGAGGAGGGGGACTTTCTCAGGCAGTTTTATAGCCAAGAATCAGTTGCATCTAATAACAAAGGTGATGAAAATCTCTTTAAGAATAACGAAATAGAACAAAACAAAAGTAATTCATGTGCCGAGTTTGGTAGCCAAGAATCAGACACAAGTACTACAAAAGATTGTGAAGATCTTTTTAAGAATAATGAAATTATACACATTGAGAGTACTGCATGTGCTGATGTCACTCCAACTCCGGGACCTCAACAAGATAAGGCTTCAGATTCAATTCTGGCTCAAGATAAGCCTTGCGTTAATGCAAATAGTAATACTTCAGGCACACTTCTAGGAGTTCAGGAGCTGGACCATCTCAAGCAATTTTGCAGGTCTGACATTAATGAATCACCAAAAAATGAGAGCAGAGTTAATTGGGATCTGAACACAAGCATAGTAGAAGGTGAAGAGCAAACTGCAGTATCTTGTGATGTTCAGATTTCCTCCGAAGCTTCGACAGCTATGTCTGATGTGAATGTGGGTTTATCTGAGACTTTAGAAAGAGAAATCGTTGGTCAACAACGGTCAACCCATGTAGAAGAACCAAAGGTCATTACTCCTGTTTCTAGTCTCGAATGTGTACTCACCATTGCACAAGGGGTAAATGATGTAAACAATCATCAGGGCATGACGGAAATACTCGTAGAAACTAGAAGCACGGGAAAGAAGAAAAGTAAAATTGAGAAAAAGCAAGAACCCAAAATTGACTGGGAAGCATTGAGGAAAACTTATTGCAAATCTGGCAGAAAAGAAACCAACGAGAATTCCATGGATGCAGTTGATTGGGATGCAGTTAGGCGCGCTCCTGTCGAAGAACTTGCTAAAGTCATAGCAGAGCGAGGAATGAGTAATGTGCTAGCTGGACGAATAAAAGACTTTTTGGATAGAGTTTATCAAGACCATGGAGCTATTGATCTTGAGTGGGTAAGGGACCTTCCACCCGACACGGCAAAGGAATTCTTGCTGAGCATCGATGGAATCGGTTTGAAAAGTGTGGAGTGTGTACGACTTCTAACGCTACATCATCTTGCTTTTCCTGTTGACACAAATGTTGGTCGAGTAGCCACACGTCTAGGATGGGTCCCACTGCAACCCCTCCCTGGTGATGTTCCAATTCATCTTTTGAACGCATACCCAATGGTGGACAACATTCAAAAATACCTCTTCCCTAGGCTGTGTTCCCTTGACCAAAGAACATTGTATGAATTACATTATCAGTTGATCACATTTGGAAAGGTATTTTGCACCAAAGTAAAACCAAATTGCAATGCGTGTCCGATGAGAGCAGAGTGCAGGCATTATGCAAGTGCAGTTGCTAGTGGTAGGCTCAAACTTCCTGGACCAAAGGAAGGTAGTCATGTAACTTCAATCGTGCCTGCTGGAAATGAACAAAACTATTCAGTGTTTGGTACACCGCCATCAATTATTGACCTAGAAGTCAACAAAGCAAGTTCAAGTTATTATGGTCAAAATTGTGAACCCATAATTGAAGTTCCACAGTCCCCTGTGCCTGAAGTGGAAGACACGCCAACATTTGTAGACGACATTGAAGATTTATTTTGTGAGTCTGATGATGAAATTCCCACCATCAGACTTAACACGGAAGAGTTCAGGGAAACTTTAAAAGATACTATAGATGCAAATAATATTCCTCTCTTGGAGGGTGATATGTCAAAAACTCTAGTTTCTTTGTCAGCAGAAGCTGCTACCTTTCGTATGCCACAAGTTAAGTATATAGCCAGACTGAGGACTCTGCACGTTGTCTGTGAACTGCCAGACTTCCATCCATGCTTGGCCGGGTTTGATGAAAGGGAACATGATGATCCATCCCCATACCTGCTTAAGATTTGGCTTCCAGGTGAAATTCCCAATTCATTGGGATATGCTGAAAACAGAGTATGTGATTTTGCCAGCAATAATCATGAAGAAACAGTTAAAGCAACTGTCCTGATTCCTTGTCGAACTGCAACTAGAGGGACATTTCCCCTTAACGGAACATATTTTCAGGTCAATGAGGTATTTGCCGATGATGAAACCACAAACTTTCCAATGGATGTTCCAAGAAGTCTGGTGCGGAATTTGCCAACACGAGAACTAGGTTGTGGGTCATCTGCAACATCAATATTCAGAGCCCTGCCAACTGGTATTATTCAGCGCTTGTTTTGGAGAGGGTCGATATGTGTGAGAGGATTCAATAGAAAAACAAGGAAACCTCATCCTCTTCACAGAAGATTTCATATATCAACAGCGGCGATTGCTGCAGATAACAAAAAGTTAGGGAAGAGATAA	4974	40.73	MEKDATWIPLTPGKPISATVGYSHESALTSGKGIIKEIINVAFPCVDLFDTTRYMEKSGMNETDKLPASILDEHEAVFGAAVTEPEKTALGQDDTSCVQEEAVKVPSRYDGKKVADGFDESLGSVPTPSKTEDTRKRRSNGIDLNKKPSQRPRVKKHRPKIFDDSKPKKVPKAQIPKGSTPRPKKTQKPATPNRVQEKRASSKHNKNTGLTDCTQNSTSHGHVDGEQVVQEASRDSLSVVKPCKRYLDFDSNLVVQESHNVSKIQEPGRPFLNLEIFYCLGKIVTSKRNTPRKSRFPKKSHQASEDSLGSNDKQKHEQDFCDTREQASENLLGGNDKQKHEQDFCITREEEAGKSSSKYVYFYQRRKKINSKVISYTPTVQVYRRTFRENNCFQSSKKSGPNFPKIFKKRRTLRKKANIGWWCIDHVEDGHGNGKRSLRKCIQATGKRVQISVDKSKDQKRSVKKPAILRGEWLKSIFSPPRRKRSIRHIRRRGNNKDFLNSSRMPYDDDTYLKCQEESSLQNTEGNFDIDLRCQEENFLQITDSLPLQDDLDINREEENFLQITDSIPLHEVPVHMIESFTSRHHDVQQIDDFVCGLNCFQLQEVPMSQSLVPRYVDTEEDRTSCAHLYAQNMTPYLIAKFASLDINGQCRKPVARDPNTGRIASLDTNDQCKELVVRDEKVSGAIVKAAPTKKRKVLPKVDLDNETLRVWKLLMENDGSEQLEEMDKDKDEWWDRQREIFRGRVDSFIAKMHLIQGDRRFSPWKGSVVDSVAGVYLTQNVSDHLSSSAFMSVAARFPVKPRSKEADDYFGEVATRKETVTCYTKVDEDLCRNNEMEQNVITSCADAIPTTEPKQDVVSNPILAQDGPYANENSNTFRKLLEVEEGDFLRQFYSQESVASNNKGDENLFKNNEIEQNKSNSCAEFGSQESDTSTTKDCEDLFKNNEIIHIESTACADVTPTPGPQQDKASDSILAQDKPCVNANSNTSGTLLGVQELDHLKQFCRSDINESPKNESRVNWDLNTSIVEGEEQTAVSCDVQISSEASTAMSDVNVGLSETLEREIVGQQRSTHVEEPKVITPVSSLECVLTIAQGVNDVNNHQGMTEILVETRSTGKKKSKIEKKQEPKIDWEALRKTYCKSGRKETNENSMDAVDWDAVRRAPVEELAKVIAERGMSNVLAGRIKDFLDRVYQDHGAIDLEWVRDLPPDTAKEFLLSIDGIGLKSVECVRLLTLHHLAFPVDTNVGRVATRLGWVPLQPLPGDVPIHLLNAYPMVDNIQKYLFPRLCSLDQRTLYELHYQLITFGKVFCTKVKPNCNACPMRAECRHYASAVASGRLKLPGPKEGSHVTSIVPAGNEQNYSVFGTPPSIIDLEVNKASSSYYGQNCEPIIEVPQSPVPEVEDTPTFVDDIEDLFCESDDEIPTIRLNTEEFRETLKDTIDANNIPLLEGDMSKTLVSLSAEAATFRMPQVKYIARLRTLHVVCELPDFHPCLAGFDEREHDDPSPYLLKIWLPGEIPNSLGYAENRVCDFASNNHEETVKATVLIPCRTATRGTFPLNGTYFQVNEVFADDETTNFPMDVPRSLVRNLPTRELGCGSSATSIFRALPTGIIQRLFWRGSICVRGFNRKTRKPHPLHRRFHISTAAIAADNKKLGKR	1657

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05114	1657	Gene3D	-	1238	1326	IPR023170	-
	Soca5g05114	1657	Pfam	RRM in Demeter	1543	1642	IPR028925	-
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	180	196	-	-
	Soca5g05114	1657	SMART	endo3end	1134	1308	IPR003265	GO:0006284(InterPro)
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	157	171	-	-
	Soca5g05114	1657	SUPERFAMILY	DNA-glycosylase	744	1331	IPR011257	GO:0003824(InterPro)\|GO:0006281(InterPro)
	Soca5g05114	1657	PANTHER	TRANSCRIPTIONAL ACTIVATOR DEMETER	106	1653	IPR044811	GO:0019104(InterPro)\|GO:0035514(InterPro)\|GO:0141166(InterPro)
	Soca5g05114	1657	CDD	ENDO3c	1156	1262	IPR003265	GO:0006284(InterPro)
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	130	144	-	-
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	101	225	-	-
	Soca5g05114	1657	SMART	ccc3	1309	1329	IPR003651	GO:0051539(InterPro)
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	298	321	-	-
	Soca5g05114	1657	Gene3D	Hypothetical protein; domain 2	1153	1237	-	-
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	289	321	-	-
	Soca5g05114	1657	MobiDBLite	consensus disorder prediction	206	224	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05114	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr3:76789638	Soca5g05114	Soca-Chr5:69420229	dispersed
	Soca	Soca-Chr5:69420229	Soca7g02889	Soca-Chr7:54731855	dispersed
	Soca	Soca-Chr5:69420229	Soca1g00995	Soca-Chr1:10387727	transposed