Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g05136 | ATGGAACTCATTCCATACTCTGATCCAAACACCACCACCTCACCACCGTGGCAAGACATGTTCCGGTCAGCTTCTACCCTCAAACCACCATCTCCACCACCACAATCCACCACAAAAAACACCCCAGATGATCAAAAAGATTCACCATCATCATCATCATCATCTTTTTCAGGTGACCAACATGTACGTTTAGCATTATATATAGCCATGGCACATGCTGGCTTAGCTTTTGCTATATTTATACTTTATGGTGTTTGTAAATTACTTGAAGAATATTTAAGGCCTATTTTATGGGCTGTTCTTTGTTCTATTCCACTTAGAGGTATTCAACAGACCCTTGTTTTGTTTTGGACTAAACCTTTAGAATTAGGCCTTGTTGATACTATATTAGCTATACCTGTTTCTATATATAATGTTTTTACTGGGACATTAGTTGATGTTAAAGATTTGTTGTATAGACTTGTTTGGGTTAAGAAGGAAAGAAAACCTAATCGAAAGAGAACCGGGTTTTCGATATTGTTAAGATGGTTGGTGTCTTTTTGGGTTTTTGTTATGGCTTATGAATATTTTGGTGTTTTTGGTGGTGTTAGTTTGTTGGGGTTGGGCTTTATGTTTACTTCTAGTAATGTGAAGTCTAGTTTGTCGGTTATTTCTTCGTTTTGTGGTGGTCGTGGTGAACAAAGTCGTTATACGGGTTTTTTAACGAAAGGGGTTTTGAAAAGGTTGGAGACCATTGTGGCGATCGGGTTGATTTTTGGTATGATTTTGGGTTCTTTGAGTGTGACTGTGTTTTTTTCGTATAAGATTGGGGTTGAAGGGAAAGATGTGGTGTATTCGATAAAATCTCGTGTTGAAGAGAATAATTATGCCGAGAGAATAGGGTTAAGAAAATGGGTGGATGATAACAATGTGCCAGGAATGGTGGATAAGTACGCGACTCAGTTTTATGAAACTGTGAATGAACAGATTGATAGTTTGGCAATGCAGTATAATGTGACGGAAATTGTTCAGGAAATGAAACAAGTGATTGCGCCAAGGTTAACCCCGACAAACTCTTCTACACCTTCTACCGCAATAGTAACGTCTAGCCCGTACGCTGAAAAGATACGAAGTTTGAAAAAAATGTTTACTAATCGTGAATGGTCAGCAATCTATCCAGAAGTTAATGCTTTGTTAAAAGAGGCTCGGGTTAGCAAAGCAGATATGATTGAAAAAGCTAAAGCAATTGCTTTTCAAGGAAAAGATGTGCTTCAACGAGTGCTTGCAAGTAGTAAATCGATTGTTGGAGGCAGTACTAAGCTTGTTTTGATAGTTATTGAGTCGATTGTTTCTGGAGCAGCGGGTCTTTTTAATTTTGTTTCGCAGTTGATGGTTTTCATATGGGTTTTGTACTCTTTGATAACTTCAGATTCTGGTGGAGTTACAGAAAAAGTTATGCATATGATTCCAATTTCAAGATCTGCTAGGACACGGTGTGTTGAGGTTCTTGATAAAGCCATTTCCGGAGTTCTTTTGGCTACAGTAGAGATTGCCTTTTTTCAAGGATGTCTCACTTGGCTTTTATTTAGACTTTTTAATATCCATTTCTTGTATATGTCAACGCTGCTTGCATTTATCAACCCTTTGCTCCCGATATTTCCCTATTTTTTCTCAACAATTCCAGCAGCAATGCAATTGGTACTGGAAGGTAGATATGTTGATGCTGTTTGCTTGTCGATTATTCACCTTGTGCTTATAGACTATGGTACTACCGAGATTTTAGAGGACGTACCTGGTTATAGTGCATATCTCACTGGGCTCAGTATCATTGGTGGAGTGGCATTGTTCCCATCTGCATTGGAGGGAGCGATAATGGGGCCATTGATAACGACTGTTGTTATTGCTCTTAAGGATTTGTATGTAGAATATGTTTTGGATGAACCAAAAGAAGATAAAAAGGAGTAA | 1944 | 38.27 | MELIPYSDPNTTTSPPWQDMFRSASTLKPPSPPPQSTTKNTPDDQKDSPSSSSSSFSGDQHVRLALYIAMAHAGLAFAIFILYGVCKLLEEYLRPILWAVLCSIPLRGIQQTLVLFWTKPLELGLVDTILAIPVSIYNVFTGTLVDVKDLLYRLVWVKKERKPNRKRTGFSILLRWLVSFWVFVMAYEYFGVFGGVSLLGLGFMFTSSNVKSSLSVISSFCGGRGEQSRYTGFLTKGVLKRLETIVAIGLIFGMILGSLSVTVFFSYKIGVEGKDVVYSIKSRVEENNYAERIGLRKWVDDNNVPGMVDKYATQFYETVNEQIDSLAMQYNVTEIVQEMKQVIAPRLTPTNSSTPSTAIVTSSPYAEKIRSLKKMFTNREWSAIYPEVNALLKEARVSKADMIEKAKAIAFQGKDVLQRVLASSKSIVGGSTKLVLIVIESIVSGAAGLFNFVSQLMVFIWVLYSLITSDSGGVTEKVMHMIPISRSARTRCVEVLDKAISGVLLATVEIAFFQGCLTWLLFRLFNIHFLYMSTLLAFINPLLPIFPYFFSTIPAAMQLVLEGRYVDAVCLSIIHLVLIDYGTTEILEDVPGYSAYLTGLSIIGGVALFPSALEGAIMGPLITTVVIALKDLYVEYVLDEPKEDKKE | 647 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g05136 | 647 | PANTHER | TRANSMEMBRANE PROTEIN | 20 | 644 | IPR002549 | - | |
| Soca5g05136 | 647 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Soca5g05136 | 647 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Soca5g05136 | 647 | MobiDBLite | consensus disorder prediction | 38 | 57 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g05136 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 155636 | Soca2g04597 | Soca5g05136 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr2:90398422 | Soca5g05136 | Soca-Chr5:69632320 | dispersed |