Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05208	ATGTCTTTGTTGAGGGAAGAAGAGAACCCGGGCGCAAGCTGCCCAAACCAACCCAATTCTAAGACGAGTGGTAACAGTCAGAAGAAAGTAGTAAAATGGTTGAAGCATTATTCGTCTGATCATCGGATATTGTTGGTAGGAGAAGGAGATTTTTCATTTTCACATAGTTTGGGTATGGCTTTCGGTGATGCTTCCAACATTGTGGCTACTTCCCTTGATTCTTATGATGCTGTGATTAAGAAATACAAGGGAGCAAAAACAAACTTGGAAATCTTGCATTCTCTTGGAGCTAAGTTGTTACATGAAGTTGATGCACTCCAAATGAAGCTTCATACAGATCTTCAAATGCACAAGTTTGACCGGATTATTTATAACTTTCCACATGCTGGTTTTTGGGGGCCTGAAGATGATCAAAAAGTCATCATGATGCACAAAAATCTGGTTTGTGGTTTCTTTAAGAACGCAAGTGGCATGTTGCTTCCAAATGGTGAAGTTCATGTAACCCACAAGACTTCAGATCCTTACCAATCTTGGAACATTGAAGAACTTGCTACTCAAAATTCTCTAACATTGCTTAAACGCATCGAGTTCAAACTTAATGATTATCCAGGTTACAGCAATAAAAGAGGTGATGGAAACAGATCTGACGCATCATTTCATTTAGGGGAGTGCAGTACATATAAGTTTGTGTTGTTTTCGAAAGGCAATTCAAGCAAGGAAGATGGATTGTGCAATTGTGACCCTCCTTTAAGAAGAGTTGAGCATACATCTTGGTCAAAGAGAAACCCAAACAGAAGATTTATGGGTTGTCCTAAATATAGAGTAAGCTTGTTTGTAATTTTTGAGATTAATTGTTTACGATTACAAATTAATTTTGAGATTGTATGTAGGGACCTGAAAGTGAGCATTGTAAATCCGTTGACTGGATTGATCCTCCTTTAA	942	38.11	MSLLREEENPGASCPNQPNSKTSGNSQKKVVKWLKHYSSDHRILLVGEGDFSFSHSLGMAFGDASNIVATSLDSYDAVIKKYKGAKTNLEILHSLGAKLLHEVDALQMKLHTDLQMHKFDRIIYNFPHAGFWGPEDDQKVIMMHKNLVCGFFKNASGMLLPNGEVHVTHKTSDPYQSWNIEELATQNSLTLLKRIEFKLNDYPGYSNKRGDGNRSDASFHLGECSTYKFVLFSKGNSSKEDGLCNCDPPLRRVEHTSWSKRNPNRRFMGCPKYRVSLFVIFEINCLRLQINFEIVCRDLKVSIVNPLTGLILL	313

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05208	313	PANTHER	PHENYLALANYL-TRNA SYNTHETASE	25	209	-	GO:0005737(PANTHER)\|GO:0070042(PANTHER)\|GO:0070475(PANTHER)
	Soca5g05208	313	MobiDBLite	consensus disorder prediction	1	26	-	-
	Soca5g05208	313	FunFam	Os09g0479300 protein	41	192	-	-
	Soca5g05208	313	Pfam	rRNA (uridine-N3-)-methyltransferase BTM5-like	44	209	IPR019446	GO:0070042(InterPro)\|GO:0070475(InterPro)
	Soca5g05208	313	MobiDBLite	consensus disorder prediction	12	26	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05208	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:70586668	Soca8g02291	Soca-Chr8:32787774	dispersed
	Soca	Soca-Chr5:70586668	Soca5g05208	Soca-Chr5:70586668	tandem
	Soca	Soca-Chr5:70586668	Soca5g05209	Soca-Chr5:70586668	tandem