Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05209	ATGTCTTTGTTGAGGGAAGAAGAGAACCCGGGCGCAAGCTGCCCAAACCAACCCAATTCTAAGACGAGTGGTAACAGTCAGAAGAAAGTAGTAAAATGGTTGAAGCATTATTCGTCTGATCATCGGATATTGTTGGTAGGAGAAGGAGATTTTTCATTTTCACATAGTTTGGGTATGGCTTTCGGTGATGCTTCCAACATTGTGGCTACTTCCCTTGATTCTTATGATGCTGTGATTAAGAAATACAAGGGAGCAAAAACAAACTTGGAAATCTTGCATTCTCTTGGAGCTAAGTTGTTACATGAAGTTGATGCACTCCAAATGAAGCTTCATACAGATCTTCAAATGCACAAGTTTGACCGGATTATTTATAACTTTCCACATGCTGGTTTTTGGGGGCCTGAAGATGATCAAAAAGTCATCATGATGCACAAAAATCTGGTTTGTGGTTTCTTTAAGAACGCAAGTGGCATGTTGCTTCCAAATGGTGAAGTTCATGTAACCCACAAGACTTCAGATCCTTACCAATCTTGGAACATTGAAGAACTTGCTACTCAAAATTCTCTAACATTGCTTAAACGCATCGAGTTCAAACTTAATGATTATCCAGGTTACAGCAATAAAAGAGGTGATGGAAACAGATCTGACGCATCATTTCATTTAGGGGAGTGCAGTACATATAAGTTTGTGTTGTTTTCGAAAGGCAATTCAAGCAAGGAAGATGGATTGTGCAATTGTGACCCTCCTTTAAGAAGAGTTGAGCATACATCTTGGTCAAAGAGAAACCCAAACAGAAGATTTATGGGTTGTCCTAAATATAGAGGACCTGAAAGTGAGCATTGTAAATCCGTTGACTGGATTGATCCTCCTTTAAGTGACCGGTATAAAAAAGCAATGTATGAGCTTCGTTTACTTGGTCATGAAAGGGATGAGAAAGAAAAACTAATGCAGTCTCTAACTCGTCAAAGGAATGAGAAAGAAGCAGCAATTAAAGCTTTAGTTGAAGAAAAGATTCAAAAAGAAAAGTTAACGGAAGCTTTGAAATCCCTGAATACAGAAACTGATGCATACAAAGAAAAACTAATGCAGTCTCTAACTCGTCAAAGGAATGAGAAAGAAGTAGCAATTGAAGCTTTACTTGAAGAAAAGATTCAAAACAAAAAGTTAATGGAGGCTTTGAAATCCCAAAATAAAGAAATTGATGCATACAAAAAATGGTGGAATAAGCTCTATGAAAGATGTTTGATGTTATTCTCTGGTTGCTTCTTGTGTGATTAA	1278	37.4	MSLLREEENPGASCPNQPNSKTSGNSQKKVVKWLKHYSSDHRILLVGEGDFSFSHSLGMAFGDASNIVATSLDSYDAVIKKYKGAKTNLEILHSLGAKLLHEVDALQMKLHTDLQMHKFDRIIYNFPHAGFWGPEDDQKVIMMHKNLVCGFFKNASGMLLPNGEVHVTHKTSDPYQSWNIEELATQNSLTLLKRIEFKLNDYPGYSNKRGDGNRSDASFHLGECSTYKFVLFSKGNSSKEDGLCNCDPPLRRVEHTSWSKRNPNRRFMGCPKYRGPESEHCKSVDWIDPPLSDRYKKAMYELRLLGHERDEKEKLMQSLTRQRNEKEAAIKALVEEKIQKEKLTEALKSLNTETDAYKEKLMQSLTRQRNEKEVAIEALLEEKIQNKKLMEALKSQNKEIDAYKKWWNKLYERCLMLFSGCFLCD	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05209	425	MobiDBLite	consensus disorder prediction	1	26	-	-
	Soca5g05209	425	FunFam	Os09g0479300 protein	41	192	-	-
	Soca5g05209	425	Pfam	rRNA (uridine-N3-)-methyltransferase BTM5-like	44	209	IPR019446	GO:0070042(InterPro)\|GO:0070475(InterPro)
	Soca5g05209	425	Coils	Coil	302	360	-	-
	Soca5g05209	425	PANTHER	PHENYLALANYL-TRNA SYNTHETASE	25	209	-	GO:0005737(PANTHER)\|GO:0070042(PANTHER)\|GO:0070475(PANTHER)
	Soca5g05209	425	Coils	Coil	362	399	-	-
	Soca5g05209	425	MobiDBLite	consensus disorder prediction	12	26	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05209	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:70586668	Soca5g05209	Soca-Chr5:70586668	dispersed
	Soca	Soca-Chr5:70586668	Soca5g05209	Soca-Chr5:70586668	dispersed
	Soca	Soca-Chr5:70586668	Soca8g02291	Soca-Chr8:32787774	dispersed
	Soca	Soca-Chr5:70586668	Soca5g05209	Soca-Chr5:70586668	tandem