Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05234	ATGAGCTGGTGGCGATCAGGGTTCGTCGGGGCTGCAAGGAAAAAACTCGAGGACAGCAATCCGTCACGCAAGTACCAGAGATTTGCATTAATAGTCGGGGTTACTGGTATTGTTGGCAATAGCCTTGCTGAAATCCTACCGCTCCATGATACCCCGGGTGGTCCTTGGAAGGTCTATGGAGTCGCCCGTCGCCCTAGACCACCATGGAATGCTGATTACCCGATGGAATACATCCAATGTGATATAACAAATCCAGAAGAAACAGAATCAAAACTCTCAAATTTACCAGACCTAACCCATGTATTCTACGTTACATGGGCCAACTGCTCAACCGAAGAAGAAAATTGCCAAGTAAATGGGCAAATGCTCAGAAATGTCCTCAATGCAGTAATGCCTAACTCCCCTAATTTACAACATATATCCTTACAAACGGGCCGTAAGCATTACGTCGGGCCATTTGAACAATGGGGTACTAATGAGTGTCATGATGGTCCTTTTTATGAAGATCTTCCTAGGCTTAAGAACCTTAATTTCTATTACACACTTGAAGATATATTGTTTAGTGAGGTAACAAAAAAGGAAGGATTAACATGGTCTGTTCATAGACCAGGGTTGATTTTTGGGTTTTCACCAAACAGTATGATGAATATTTTAGGAAGTTTATGTGTTTATGCATCCATATGTAAGTATGAAGGTGAACCACTAAAGTTTCCAGGCACAAAAGAAGCATGGAATAGCTATAGTGATGCTTCTGATGCCGACCTGGTTGCCGAGCACCATATATGGGCGGCTGTGGATCCTATTGCGAAAAATGAAGCTTTTAACATCAGTAATGGCGATGTGTTCAAATGGAAGGACATTTGGAAAGTGTTGTCTGAGCAATTTGATGTAGAAAATGGAGGGCTTCAAGAGGACGAAGAGAGGAAGAGCTTGAACGAGATGATGAAAGATAAAGGGCCAGCTTGGGATGCTATTGTAACGGAGAAGGAGCTTTTACCGACTAAGTTAGAGCAAGTTGGAGGATGGTGGTTTGTGGATCTTATTCTTAGCAATGAGGGCATGTTAGACATAATGAACAAGAGTAAAGAGCATGGTTTTTTAGGGTTTCGAAACTCAAAATCATCTTTGGTTTCTTGGATAGATAAGATAAAATGTTGCAAGATTGTTCCATAG	1173	41.77	MSWWRSGFVGAARKKLEDSNPSRKYQRFALIVGVTGIVGNSLAEILPLHDTPGGPWKVYGVARRPRPPWNADYPMEYIQCDITNPEETESKLSNLPDLTHVFYVTWANCSTEEENCQVNGQMLRNVLNAVMPNSPNLQHISLQTGRKHYVGPFEQWGTNECHDGPFYEDLPRLKNLNFYYTLEDILFSEVTKKEGLTWSVHRPGLIFGFSPNSMMNILGSLCVYASICKYEGEPLKFPGTKEAWNSYSDASDADLVAEHHIWAAVDPIAKNEAFNISNGDVFKWKDIWKVLSEQFDVENGGLQEDEERKSLNEMMKDKGPAWDAIVTEKELLPTKLEQVGGWWFVDLILSNEGMLDIMNKSKEHGFLGFRNSKSSLVSWIDKIKCCKIVP	390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05234	390	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	29	298	IPR036291	-
	Soca5g05234	390	Gene3D	-	27	390	-	-
	Soca5g05234	390	PANTHER	3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE	23	390	-	-
	Soca5g05234	390	CDD	5beta-POR-like-SDR-a	29	326	-	-
	Soca5g05234	390	FunFam	Iridoid synthase	25	390	-	-
	Soca5g05234	390	Pfam	PRISE-like Rossmann-fold domain	87	331	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05234	K22419	Delta4-3-oxosteroid 5beta-reductase [EC:1.3.1.3]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:71084185	Soca9g01513	Soca-Chr9:16922395	dispersed
	Soca	Soca-Chr5:71084185	Soca8g04402	Soca-Chr8:70198586	transposed