AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g05253 ATGCCATCACCACCACCATCAACCACCACTACCTACACCACCATCCCCATTTCCGGCACCGACGTCATATTCCGGTCGTTCCAAAACCTATCAACTTTCTTGTCCCACCACCGTCCCTGGCCGGAATTCATCTCCACGTTTTCTTCCTTCACCTGTCCAAACTCTTTTACAAGAATCCCATCAAACTTGAAACATTTCTCCATTAACTACGGCATGATCACCGCAGCATGTGCCGCGGTTTCTTTGCTAGGAAACCCGCTTAGGTTGCTAGCATTTGGTATTGTTTTCACATTATGGCTTGTGTTTTACTTTTTACGTGAAGATCCTATGGTTGTGTATGGACATCATGTGCATGATCGTGTTGTGACTTGTGGGCTTGTTTTGGTTAGTTTTGTTTGTGTCTTGTGTTTAGGTTTTGGTTGGAATCTTGTCGCCGGGATCACGGTTGGTGCTTTAATTTCGGTCGTTCATGCTGTTTTTCGTAACGATGAAGGGATTTATCTAGATGAAAATGATGCAGTTTCAGAAGGATTGATTTCACCTAGAGTTCACAATGTATAA 561 43.67 MPSPPPSTTTTYTTIPISGTDVIFRSFQNLSTFLSHHRPWPEFISTFSSFTCPNSFTRIPSNLKHFSINYGMITAACAAVSLLGNPLRLLAFGIVFTLWLVFYFLREDPMVVYGHHVHDRVVTCGLVLVSFVCVLCLGFGWNLVAGITVGALISVVHAVFRNDEGIYLDENDAVSEGLISPRVHNV 186
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g05253 186 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 10 175 IPR004895 GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0016192(PANTHER)
Soca5g05253 186 Pfam PRA1 family protein 34 170 IPR004895 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g05253 K20359 PRA1 family protein 1