Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05368	ATGGAAACAATGAGCAAATCAGGTTTTTTACCTGGAGCTCTAACTGAGGATGAGATGGAGAACCTTGCTAGGAATGAGAGAATGGCTATATATGTGTCGAATGTAGCTAACTTGGTGCTTTTCATTGCTAAAGTCTACGCCTCTTTTGAGAGCAGATCGTTGGCGGTTATGGCATCAACTCTGGATTCGTTTTTGGACTTGTTATCTGGATTTATTTTATGGTTTACTTCAAACGCTATGAGAAATCCTAACCAATATCACTATCCGATTGGGAAGAATCGTATGCAACCTGTTGGTATCGTCGTTTTCGCATCAGTGATGGCAACTCTTGGCTTCCAAATATTGCTAGAGTCTGCTAGGGAACTCCTTGCACAGACTCACCCTAGCAAGAATCATGACAACGAAATGTGGGTGATCGGTATCATGGTGTTTGTTACAGTCGTGAAATTTATACTCATGGTTTATTGCCGAAGATTTGAAAATGAAATAGTGAGAGCCTACGCTCAAGATCATTTCTTCGATGTCATCACAAATTCCATCGGGTTAGCAGCTACTGTTTTGGCCATACGATACAAATGGTGGATCGATCCTGTTGGAGCAATAATTATAGCGTTCTATACCATCAATACATGGACAAAGACCGTAATAGAGAACGTATGGATGTTAATCGGAAGAACGGCTCCTCCAGAGTTCTTGGCAAAATTGACATATTTGGTTTGGAACCATCACAAAGAAATACAACACATTGATACAGTTCGAGCATACACATTCGGGAATCATTACTTCGTGGAGGTAGATATAGTGTTGCCCGCGGATATGGTACTAAGTGAGGCACATAATATCGGCGAAATGTTGCAAGAAAAGCTAGAGCAATTGCCGGACGTAGAACGAGCGTTTGTTCATATCGATTTCGAGTATACTCATAGACCCGAACATAAAGGAAAGGTTTGA	951	41.11	METMSKSGFLPGALTEDEMENLARNERMAIYVSNVANLVLFIAKVYASFESRSLAVMASTLDSFLDLLSGFILWFTSNAMRNPNQYHYPIGKNRMQPVGIVVFASVMATLGFQILLESARELLAQTHPSKNHDNEMWVIGIMVFVTVVKFILMVYCRRFENEIVRAYAQDHFFDVITNSIGLAATVLAIRYKWWIDPVGAIIIAFYTINTWTKTVIENVWMLIGRTAPPEFLAKLTYLVWNHHKEIQHIDTVRAYTFGNHYFVEVDIVLPADMVLSEAHNIGEMLQEKLEQLPDVERAFVHIDFEYTHRPEHKGKV	316

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05368	316	Gene3D	Cation efflux protein transmembrane domain	27	222	IPR027469	-
	Soca5g05368	316	Gene3D	Cation efflux protein, cytoplasmic domain	226	304	IPR036837	-
	Soca5g05368	316	PANTHER	MITOCHONDRIAL METAL TRANSPORTER 1-RELATED	18	313	IPR050291	GO:0008324(PANTHER)\|GO:0016020(PANTHER)
	Soca5g05368	316	NCBIfam	cation diffusion facilitator family transporter	29	303	IPR002524	GO:0006812(InterPro)\|GO:0008324(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Soca5g05368	316	FunFam	Metal tolerance protein 11	29	222	-	-
	Soca5g05368	316	Pfam	Cation efflux family	31	222	IPR002524	GO:0006812(InterPro)\|GO:0008324(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Soca5g05368	316	Pfam	Dimerisation domain of Zinc Transporter	228	303	IPR027470	-
	Soca5g05368	316	SUPERFAMILY	Cation efflux protein transmembrane domain-like	25	224	IPR027469	-
	Soca5g05368	316	SUPERFAMILY	Cation efflux protein cytoplasmic domain-like	227	303	IPR036837	-
	Soca5g05368	316	FunFam	Metal tolerance protein 11	225	305	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05368	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155656	Soca2g04676	Soca5g05368

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:73886229	Soca7g01904	Soca-Chr7:40911534	dispersed
	Soca	Soca-Chr2:91450378	Soca5g05368	Soca-Chr5:73886229	wgd