AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g05371 ATGGTTTTTTCAGTAATCCCCAATCTTTCATCTCCGTCTTTTACTCGCCTTAATAATATTCAATCTTCTTCTCCTTCTTCTTCTTCTTATTCAAATAATAATAATAATAAATCTTTATCTCATTATCCAATTCATCATCATCATAATAATACTAATAATTGTCATGGTGGTGGTGGTCTTGGTGTGCAATCCGCTGTCGAACTGCCTCCGGTTCGGGTTCGGGTTTCACCACCACCAGACCCTCGCCAGGATTTTTATGTTAACCTTGGCTTAGCTGTCCGTACTCTCCGTCATGATTTGCCTCGTATTTTTACTTCAGATCTCAATTATGATATCTATAGGGATGATATTACTTTTGTTGATCCGTTGAACAAATTTACTGGTATAGACAATTACAAGATAATCTTTAGAGCTTTACGATTCCATGGGCGGATTCTGTTTAAAGAAATATCATTGGAGGTTTTCAGGGTTTGGCAGCCATCAGAGAATCTAATTTTGATCCGTTGGAACCTTAAGGGGGTCCCTCGAGTGCCATGGGAAGCTAAGGGAGAATTCCAGGGTACTTCACGTTACAAATTGGATCGAAATGGGAAGATTTACGAGCATAAAGTTGATAACTTGGCTTTTAATTTTCCGCAGCAGTTTAAACCGGCTGTATCTGTTCTTGATTTGGTGGCTGCTACTAGTCCCCCTGCAACTCCTAACCCTACATTCTCGTGGGGAGCACTGGATTCAACCTACTCGTCATCATGGCTAGACTTTTATCGTGCAGTTAAGAACACATTGGATCCTAGTCAAGATTTTCCGGTTTTACAAGATTGTCAATTAGTTGCTGCTACTTGTATATAG 849 39.81 MVFSVIPNLSSPSFTRLNNIQSSSPSSSSYSNNNNNKSLSHYPIHHHHNNTNNCHGGGGLGVQSAVELPPVRVRVSPPPDPRQDFYVNLGLAVRTLRHDLPRIFTSDLNYDIYRDDITFVDPLNKFTGIDNYKIIFRALRFHGRILFKEISLEVFRVWQPSENLILIRWNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQFKPAVSVLDLVAATSPPATPNPTFSWGALDSTYSSSWLDFYRAVKNTLDPSQDFPVLQDCQLVAATCI 282
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g05371 282 Pfam Uncharacterized conserved protein (DUF2358) 92 202 IPR018790 -
Soca5g05371 282 MobiDBLite consensus disorder prediction 14 59 - -
Soca5g05371 282 PANTHER RIKEN CDNA 2310061I04 GENE 26 226 IPR018790 -
Soca5g05371 282 SUPERFAMILY NTF2-like 108 203 IPR032710 -
Soca5g05371 282 MobiDBLite consensus disorder prediction 14 58 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g05371 - -