Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05387	ATGGAATTTAAAGCGCGTGATTATAAAGCTAAAGAAGCAGCTTACTCACTATCAGTTACACGAGTTTCAGTTTCTTCACATCCTTTGTCTTCATCATTATCGTCATCATTATCGTCGTGTTCGCAGGATGATGTGAATATTGAATTCTTTGATCCGTTAAGGGGGACGTCAATGGAAATAATGGAGCCTGCTGAAGATATGGCTGCTGCAGAAAAGAGTCCTGCTAGTCAAGCAGGCTCTCATCTCCCTGCCAAGGAATGGGCATCTTTTACTAAGCTATTAATGCAGAGATTTCCTGTGCCGAAAATGATACCGGTTTCTTCGTTGTCAAGCAAAACCATAAAAGGGAGTAAGGGAATTGTAGAACTAGCAACAAAGATGCAGTCAGATGAACTGAATGATTCTCAACCATTGCCCGAAGGAGGATTTAAGACTGTTACCCAGCAGGAATATATCAAACGCCTGCATGAACTTAAAGACGAGATCATGCGTGCTTGGCGTTCTGATGATCGTGTGACATCTTTAAAGTTGTCAACTAAGGTTGCTAGGCTTCTGATGGACACCTCTGTGGCACAATTTTATCCAACGTTATTTGTTCTAGCTACTGATATACTGGACATGCTAGGTGATATGGTATGGGAGAGGATTAGGGAAAAAGCCGAGTTTGCAGATGACGGGACCAAAATATGCACTTTACCAGATGACTTTAAAGCAAATAATATGTGCCTTGAAGCCAAAGAGACATGCAATAACTGGTTCAGAAAAGTTGCTTCTGTCCACGAGCTTCTTCCACGCATTTATCTCGAGCTTGCAATATTTTCATGCTGGCGGTTCCTGCATGATGATGTTGTGGATAACCTGATGCGTTTGGTTACAATGATAAGAGGGATTGCAGATCCACTGGCATCTGCCTACTGCCGCTTCTTTCTGATTCACTGTGCCCAGAAACTCTCTCAGCACGATTCAGGGCATATGATATCTTGCATTAATGACCAAAAAGTTGTACTTGCACGTATTGTATCTACGAAAGAAACTAAGTATGGGAATTTTTTGGGAGATCAAAGATTGCTTATCAGCTTGATGGAACCAACGATTGAATATAACATGAGATGTATCTTTAAAGATCCAACCCAGGTTGCAGATATGATTGTGAGACTTGATTTAGGGAAGAATCAATCAGAGATAAATGGAAAAGTTTCTTGGATATCAATTATCCTCCATTATTTTCTTAAGGAACTTCCAACTGAAATAGTGTGTACAAATGCTCTAGAAATTCTTCACCTTGTTGATTTCAGCGGTGATTGTTCATTTGACCAGTGTTCAAATTACAAGATGCTTGGACTAAAGCTCTGTGAGGGAATATGCCAAGTGAATGCAGTTGATGCAGTGATCGATGAAGTAATTCGGGTTGCTACCAGAAGGAAGAGTCTTGATGAGTACTTGAAGATCTTGGATGCTTTTATGGATATTATTCTTCAACATAAGATGGATCAATACCTAAGCTTTGTTCTAAGTGAAATATTTGAGAGATTGTGCAATGAAGTGGTTACTGAAAAAGAACTGTCTAGCCTGCAATCAATAGTTGTAAAGCTGGTCACACATTTTGATGATATGAAATACGTTTTTGAATTGAACTATCTTGTTGACATATTAGATGTCATGCACGGGAGCTCAAGAAGCATTGTGAGTATGCACATCCTAACAAATGCAACAAGAAATGATCGCATCGATGATCCTACCACGGTGAAACTGCTATTTGATGTTGCACTGTCTCTGCATGATAATGTTGATTTCTCAAGCACAAAACAGGATGATAATCATCAAGCAGAGCGTTTGATTGCTCGTTTTGTTGATAAGGTTGACCATGGTACGGATCTGGATCGCCATTTGACATTCTTGGTTGAGTGTCGTGGAGCTTTTAGTAGCATGAATGATTTGAAGGAGATCATTGTTCATTCGAGCAATCTTTTGGCAATCAGAGCTTTGAGAGAGAAAACAGATCATTTAAATTTTATCAAATCTTGCATTACATTTAATGAAGTTACAATACCATGTATTCCATCTTATTCCAGGCAGTTAATCTTATATCTTGAAACGGCAGAGGTTTCTTTATTTGGAGGACTGATTTCTCATACAGACGGACTTCTTGATTCTGCACTCGGTTGCTTACAAAATGTTTATCTGGTTGATGGCTTGAGGAAATCCAATGAAGACACTGATGGTATTGTTTCCTTAATCAGAAAGCTATGCAGCTTCATGCTCTTGGTTCCAGGTAATTTGGAACAAGGAGTTACCTACATTCCAAAGAGCATATTATCCTTGCTTGATTCACAATCATGGATCACACCCAAACTCAAGATACAAGTTTTGTGTTCTCTTCTTTCATTATCTGCAACATTTGCTCAAACTGAGCTCCCATACCATGCAATTCATGAAGAGGTTATTGGCAATGACCGTTTATTCTTTGGTCACGTGATGTATTCCCAAGAGCTTGGATCTTTATCTGGTGTTATTCTTCGTAACATGATTGATACTATTCAAAGTGAATCTTCTCAGGTTACACGCGGAAAGTTGGCACTTGAAGCTTGCAACTGCATTGCCTCATTTTATGAAGTGAATCATGAGATATCATCTGTATGCTCTAAGTTGGTGGAGACCGCCACATCCTGTCTCGGAGCTGATGATAAATATTTGCAGTCGACGATTCATTTTGTTCATAAACAGTCCCCAATGTGTGTCTAG	2742	39.42	MEFKARDYKAKEAAYSLSVTRVSVSSHPLSSSLSSSLSSCSQDDVNIEFFDPLRGTSMEIMEPAEDMAAAEKSPASQAGSHLPAKEWASFTKLLMQRFPVPKMIPVSSLSSKTIKGSKGIVELATKMQSDELNDSQPLPEGGFKTVTQQEYIKRLHELKDEIMRAWRSDDRVTSLKLSTKVARLLMDTSVAQFYPTLFVLATDILDMLGDMVWERIREKAEFADDGTKICTLPDDFKANNMCLEAKETCNNWFRKVASVHELLPRIYLELAIFSCWRFLHDDVVDNLMRLVTMIRGIADPLASAYCRFFLIHCAQKLSQHDSGHMISCINDQKVVLARIVSTKETKYGNFLGDQRLLISLMEPTIEYNMRCIFKDPTQVADMIVRLDLGKNQSEINGKVSWISIILHYFLKELPTEIVCTNALEILHLVDFSGDCSFDQCSNYKMLGLKLCEGICQVNAVDAVIDEVIRVATRRKSLDEYLKILDAFMDIILQHKMDQYLSFVLSEIFERLCNEVVTEKELSSLQSIVVKLVTHFDDMKYVFELNYLVDILDVMHGSSRSIVSMHILTNATRNDRIDDPTTVKLLFDVALSLHDNVDFSSTKQDDNHQAERLIARFVDKVDHGTDLDRHLTFLVECRGAFSSMNDLKEIIVHSSNLLAIRALREKTDHLNFIKSCITFNEVTIPCIPSYSRQLILYLETAEVSLFGGLISHTDGLLDSALGCLQNVYLVDGLRKSNEDTDGIVSLIRKLCSFMLLVPGNLEQGVTYIPKSILSLLDSQSWITPKLKIQVLCSLLSLSATFAQTELPYHAIHEEVIGNDRLFFGHVMYSQELGSLSGVILRNMIDTIQSESSQVTRGKLALEACNCIASFYEVNHEISSVCSKLVETATSCLGADDKYLQSTIHFVHKQSPMCV	913

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05387	913	PANTHER	ESOPHAGEAL CANCER ASSOCIATED PROTEIN	2	908	IPR029705	GO:0005768(PANTHER)\|GO:0032456(InterPro)\|GO:0032456(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05387	K25731	VPS35 endosomal protein-sorting factor-like

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:74171702	Soca1g05652	Soca-Chr1:76638907	dispersed