Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05389	ATGCCTGACCATCACCTACATCCGTACTTTAGGTTTCTGCTTGATAACCAAGATCTTTTGCAGTCGAAATACGATGGTCAGGATAATGATAAAACATCCAATACTGAGAATGCTGCAGGAACTGGAGCATTGTCTTTGCTTGGTTCTGTATATGGTACTGGTGAGGATGAGGATGCGGGAGTCGAGCATGCGTCATCTTCTGGAGAACGTGCATCTGGTAACACTGTGGATATAGATGCCACCATGTCTCTTGCAACTGGGAAAACCATTTTGCCTGCTGGAAAAGACGAGTCTTCCAAGCATTCACTTCCTTCAAATGAAGATGCTCCTATCCTGAAAAGGAGTTCTATATCAACTGCATCGAAGGCTGGACGGACAAGCAGTATGAAAAAAGGAGAGTCCTTGGCTTCACTTTCTGCTGTTCCAGATAAGTCGCGGGCTTCTTCGCTTCCGCCTATTCCGAAGACTGAGCAAATGGTCCTGGATCCTCCATCTGATATGAAACCGTTGGTTGACAAGATTGTAGAGTTTGTCATCAAGAATGGCAGGCAGTTTGAAGCAGTACTTATAGAACAAGACCGTGGCCATGGAAGATTCCCGTTCCTACTTCCATCTAATATATTCCATCCCTATTATTTAAAAGTTCTCCAGAAAGCCCAGGAGTCAAAATTAACGATCAAGAGTTTCCACAATGAGAAAGATGAATTCAGAGGAAATATCTTGAACAAGAAAACGTCCGTCTCAAGGGAGAATAAGAATCATCTGGTGGAATCTGATGATATACCAGTTGATCCTGAAAGGAAAGAGAAGTTTAAGATGGTAATTAACAAGTCTAAAAAGGATGGATCAGATTTGCCAGCTAAAGCCACACAACCGGAACCTAGAGTTCAGGTAGATGCTGCTCAAGCAGCAGCTATTCTTCAAGCTGCTACGAGAGGAGTTAATCATCCTAGTTTAGGAATTCTGTTTGGGCAACCCTCGAATGAAGCTGAATCCTCTGAAGCACAAATGACTCATGAGCAGAAGTTAAAGGCCGAGAGACTAAAACGGGCTAAAATGTTTGTGGCGCAGCTGAAAAGTGGAGCCGCTCCATTAGAAGCTGAAGCTCCACGTGGCTTTTCAGCCGAACCGCCAGGAACAGGGGTTGGCAATTGCCTTGCATCCAAAGATGGAGAGAGGAGCACAATGCCTTTAAAAGATGCTTCTGAGAGAAAAATAAAATCAGAAAAGGAACATTTGAATGAGGAAAGACGATCAAAGAGGAAATACCGAGCTAGAGGCGAAGCATCAGAAGTTGATGAAGAAGAAGAAGAAAATTATGACGTTGATGAGAGAGATGGAAAAAGAACACGTAGACACCATACAAAGAAGCACCGATCTCGTAATCATTCAGTTGAAGATGATAGTGAAGATGATGAAAGAGATTATAAGCATGTTAAGAGAACACATCGATCTCATCGTTCTTCACATAAACATGATGACATGGACAAAAGCAATGAAGAAAGGGATCATAAGTCATCAAGGAAGAAGAAGCATCGATCTCCTAGCTCTTATGAAGATGATGATGGACGCAAAAGTGACCGTGAATATTCCAGAAAGAAGCACCGATCACGTTATTCTTCATATGATGAAGAGTCCTGTGATGAAATTGATAGTGACCAGAAGTATTCTCGAAAAAAGCGTAAACATAGATCTCACAAATCTTCTCATCACAGTAGAGATAGGCATAAGCATAGCAAAAGTCACTCGTCTAGGCATAGACAGGAGCTTGACGTCTCATCTGAAGAAGAGCCGAGGGACCATATTAAGGCTGATAGGCATAAAAAGGGATCAAACTCAGAAAAAGAAGAACTTGAAGAGGGGGAGATCAGCTCAAAATTATCGGGCCAATCAAGAGGGGGACCTTTGGCTAAAGTTCCTGGTCGAGAACCTTCGGTTGATATTACAAGTCAAGATAGGAGACCACCGAGTCAGCCCATTGATACAACCGAGGTCCCTGATGACCTCAGGGCCAAAATCAGAGCAATGTTAATGTCTACAATGTAA	2046	42.77	MPDHHLHPYFRFLLDNQDLLQSKYDGQDNDKTSNTENAAGTGALSLLGSVYGTGEDEDAGVEHASSSGERASGNTVDIDATMSLATGKTILPAGKDESSKHSLPSNEDAPILKRSSISTASKAGRTSSMKKGESLASLSAVPDKSRASSLPPIPKTEQMVLDPPSDMKPLVDKIVEFVIKNGRQFEAVLIEQDRGHGRFPFLLPSNIFHPYYLKVLQKAQESKLTIKSFHNEKDEFRGNILNKKTSVSRENKNHLVESDDIPVDPERKEKFKMVINKSKKDGSDLPAKATQPEPRVQVDAAQAAAILQAATRGVNHPSLGILFGQPSNEAESSEAQMTHEQKLKAERLKRAKMFVAQLKSGAAPLEAEAPRGFSAEPPGTGVGNCLASKDGERSTMPLKDASERKIKSEKEHLNEERRSKRKYRARGEASEVDEEEEENYDVDERDGKRTRRHHTKKHRSRNHSVEDDSEDDERDYKHVKRTHRSHRSSHKHDDMDKSNEERDHKSSRKKKHRSPSSYEDDDGRKSDREYSRKKHRSRYSSYDEESCDEIDSDQKYSRKKRKHRSHKSSHHSRDRHKHSKSHSSRHRQELDVSSEEEPRDHIKADRHKKGSNSEKEELEEGEISSKLSGQSRGGPLAKVPGREPSVDITSQDRRPPSQPIDTTEVPDDLRAKIRAMLMSTM	681

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	513	556	-	-
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	91	164	-	-
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	584	623	-	-
	Soca5g05389	681	Coils	Coil	398	426	-	-
	Soca5g05389	681	FunFam	Splicing factor 3A subunit 1	155	225	-	-
	Soca5g05389	681	Pfam	Surp module	170	217	IPR000061	GO:0003723(InterPro)\|GO:0006396(InterPro)
	Soca5g05389	681	ProSiteProfiles	SURP motif repeat profile.	170	212	IPR000061	GO:0003723(InterPro)\|GO:0006396(InterPro)
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	393	430	-	-
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	367	669	-	-
	Soca5g05389	681	Gene3D	Surp module	155	225	IPR035967	GO:0003723(InterPro)\|GO:0006396(InterPro)
	Soca5g05389	681	SUPERFAMILY	Surp module (SWAP domain)	142	217	IPR035967	GO:0003723(InterPro)\|GO:0006396(InterPro)
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	48	79	-	-
	Soca5g05389	681	SMART	surpneu2	168	221	IPR000061	GO:0003723(InterPro)\|GO:0006396(InterPro)
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	461	479	-	-
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	109	134	-	-
	Soca5g05389	681	PANTHER	SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT	1	515	IPR040397	GO:0000395(PANTHER)
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	557	583	-	-
	Soca5g05389	681	MobiDBLite	consensus disorder prediction	489	505	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05389	-	-