Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g05416 | ATGGATAAAAACAAGGGTTTGGAATCCATACAAACATCAATTCAAAATATCAATTTAAATAATAATAATAATTCCAACAAAATTTCCAAGAATTATAATAATAACCCGTCTCTTCAATCATCTTGGTCACCTTTAGTGAAGAGAAAAGCTCCTGCTTTGGTGAGCTTATGTCTTGGAATTCTAGGCAAACATCTTGAAGATATTATTGAGGATTTAGAGCTTTTAACCAGCTTCCCACCCGACATTAAGATGGCCATAACAGCCATTGCAAGAAGAAGAAAGTTGCTAAATGATGACGTGATCGTTGCATTGGCAGAGAGCTCATGGGAAGTTCTTGATTTATCAGATTCAGATGTCTCTGATGTTGGTTTGTCGAAGGTGATAGAGACTTGCAGTCATGTGAGGGCCATGGACATAAGTCGTTGCAGCAAAATCACTTCATTTGGTGTTTCAGAACTTGTGAAGGGGTGCCATTGTCTTGAGATACTGCGATGGGGTTAA | 501 | 38.12 | MDKNKGLESIQTSIQNINLNNNNNSNKISKNYNNNPSLQSSWSPLVKRKAPALVSLCLGILGKHLEDIIEDLELLTSFPPDIKMAITAIARRRKLLNDDVIVALAESSWEVLDLSDSDVSDVGLSKVIETCSHVRAMDISRCSKITSFGVSELVKGCHCLEILRWG | 166 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g05416 | 166 | Gene3D | Ribonuclease Inhibitor | 85 | 165 | IPR032675 | - | |
| Soca5g05416 | 166 | SUPERFAMILY | RNI-like | 12 | 163 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g05416 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr5:74876409 | Soca5g05418 | Soca-Chr5:74876409 | dispersed | |
| Soca | Soca-Chr5:74876409 | Soca5g05416 | Soca-Chr5:74876409 | tandem | |
| Soca | Soca-Chr5:74876409 | Soca5g05417 | Soca-Chr5:74876409 | tandem |