AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g05446 ATGGACCCGATGAATCATGAAGTGACGCTCGATGCCTCACCAATGGGTACAGAAAAACGAAAACGCGGCCGCCCACGAAAGGATCCTAGTGAAAGGCGAGCACAAAAAGTACGTTCACAAACTGCTGCTCGCATGCCTTCTGGTTTTGTACAGTTGAACAAAACTCCCCGGGTTGACCCAATCAATGATCCAACTGAAGTTATGATTGGACAGACTGTCACCGGTGTTGTCGAAGCAACTTTTGATGCTGGTTACCTGCTCGCTGTTAGGATCGGGAACTCAAATATCACATTAAGGGGTGCGGTTTTCAAACCGGGCCACACTGCACCCGTCACACCTGAAAATGATGTGGCACCTCATGCTGAGATGATTAGAAGAACCGAAGTTCCATTCCCAGCAGAGCTTCTGCCTAAGCGTAGACGCAAACGTCGATCAAAAGAGAAAAGTATGCAGCTTGTGGCTTATGCAGGGAATGGGGGCGACCCGGTGCGTCCTAATTCACCATCTAAAGGGAACTATGTTCTAGCCCCTTCAGTCCCATCGGTTGGTGCGAGAGGAACCGTGGTTCCCGTCGTTCTTCAACCTCTTAACCTATCAAATGGTTTATCGACCAATCAACCTGCTCCTCATTTGAGGGCTGCTCAAGGCAAGCCGGTGCACTCAGTTCTGCCATTGGCAGTTTGCCCACCGAATGGCTCAACAAGCCAAGCATCTGAGTCTCAAACTAGCTCCCAGTTTACAGTTACACCCACGGGTTCTGGAAATGAAAATGCTTCTTTCAAACAAACAGAGGCTAAGGCGAATAAATCAAATGATGCGCATGATCCAGTTGTGAAAACAGAATCAGATGTTGGGGACATGAATGAGCCTCTTTTTGTTGAACCCCTGCAAACTCGGCACACGGTTCATCATTTCCAACCTCCACCTGGAATGGGAGCTGTGATGCATAGTGGAACTGGGAGAATGACGGAGCTTTTGCAGGCTGTTCAGCAGAATATCGGTGATGACCATGGTTCTCGAAATGGACATCCAGCCGGAGTTTATAATGTGAGTCGTAACAGAGATGATGAAACTGGTCAGGCCGGAAGGATGTAA 1095 48.68 MDPMNHEVTLDASPMGTEKRKRGRPRKDPSERRAQKVRSQTAARMPSGFVQLNKTPRVDPINDPTEVMIGQTVTGVVEATFDAGYLLAVRIGNSNITLRGAVFKPGHTAPVTPENDVAPHAEMIRRTEVPFPAELLPKRRRKRRSKEKSMQLVAYAGNGGDPVRPNSPSKGNYVLAPSVPSVGARGTVVPVVLQPLNLSNGLSTNQPAPHLRAAQGKPVHSVLPLAVCPPNGSTSQASESQTSSQFTVTPTGSGNENASFKQTEAKANKSNDAHDPVVKTESDVGDMNEPLFVEPLQTRHTVHHFQPPPGMGAVMHSGTGRMTELLQAVQQNIGDDHGSRNGHPAGVYNVSRNRDDETGQAGRM 364
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g05446 364 MobiDBLite consensus disorder prediction 1 42 - -
Soca5g05446 364 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 342 IPR045881 -
Soca5g05446 364 MobiDBLite consensus disorder prediction 230 283 - -
Soca5g05446 364 MobiDBLite consensus disorder prediction 13 38 - -
Soca5g05446 364 MobiDBLite consensus disorder prediction 230 266 - -
Soca5g05446 364 MobiDBLite consensus disorder prediction 334 364 - -
Soca5g05446 364 MobiDBLite consensus disorder prediction 267 282 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g05446 - -