AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre11g00223 ATGCCGAAAACGGTTCCTTCTTTACAAGAAAATAAAAAACCTTTCCATCGAAGGAATGGTTCTAACGAGATTCATGTATTTGAATCTGCCCGTTACTTTGAAAGCACCAACAACACCCTCACTCATAAGCAATATATGAGAGAGGGTGTTGGAAGGTTGAGTCTTGATATCCCAAACACCAGAAGAAACTCGATACCATTACAAGATATGATGATGGAGAACGGAAACTCGGTTCCATTACAAAGCATGTTAATGGATCAAAACCCCATGATGATGAAGAATGACAAGAAGCATAAACAACCAAGCTCACCAGGAGGAAAGTTGGCTCATTTCTTGAATTCTCTTTTCAACCAAACATATTCTAAGAAGTCAAAATCAAAATCAAAGTCAACAACATCAACACATTCCTCTAAAGATGAGGATGAGAGCCCTAGTGGTTGGAGAAGAAAGAGGAGGAGTAGCATTAGCCTTTTCAGGAGTGGAAATAGTAATTCCACCATTAATGTAAGTGACACAAAATCTTCTCTTTCAAGAACACTACCACAAGCATTTACAAAGAGTTCAACTTTTAAAGATCTTAGAACCCTAGACCACAAGGCTGTATGTGAAATTACCAAAACACCCATCAATGAAAACATCAACAATAACGAAAAACTAATGATCAAAAGTGGGTTTCCTGAGCAAAAACAAGGTTCTGGAAATGGATTGTTAGATAAAGGTAGAGTTTGTGATATCAAACATGATGATGATCATCAGAAGTGTGATCTAACGGTGGAGACTAGAGAACTCAAAAGTTTCATTCTTGATGATGATGGTGGAGATAGTGATTCAAGCTCTGATCTTTTTGAGTTAACAAACTGTGATTTAGGTTACTATTCAAGTGGTTTGCCCGTTTTTGAAACAACCCACATGGATAGCATCAAGAGGGCTGCACCAATCTCTAGCTAG 948 37.87 MPKTVPSLQENKKPFHRRNGSNEIHVFESARYFESTNNTLTHKQYMREGVGRLSLDIPNTRRNSIPLQDMMMENGNSVPLQSMLMDQNPMMMKNDKKHKQPSSPGGKLAHFLNSLFNQTYSKKSKSKSKSTTSTHSSKDEDESPSGWRRKRRSSISLFRSGNSNSTINVSDTKSSLSRTLPQAFTKSSTFKDLRTLDHKAVCEITKTPINENINNNEKLMIKSGFPEQKQGSGNGLLDKGRVCDIKHDDDHQKCDLTVETRELKSFILDDDGGDSDSSSDLFELTNCDLGYYSSGLPVFETTHMDSIKRAAPISS 315
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre11g00223 315 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 64 309 IPR039621 GO:0009734(InterPro)
Stre11g00223 315 MobiDBLite consensus disorder prediction 119 178 - -
Stre11g00223 315 MobiDBLite consensus disorder prediction 132 149 - -
Stre11g00223 315 MobiDBLite consensus disorder prediction 156 178 - -
Stre11g00223 315 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre11g00223 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
158238 Stre11g00223 Stre8g02874
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr11:7311885 Stre5g00314 Stre-Chr5:7867580 dispersed
Stre Stre-Chr11:7311885 Stre8g02874 Stre-Chr8:95192045 wgd