AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre11g01638 ATGGCGGACTATCACTTTGTGTACAAAGATGTTGAAGGATCATCGACTCAATGGGACGATATCCAAAGAAAACTCGGTAATTTACCTCCCAAACCCCCTGCTTTCAAACCCGACCCGTTTTCTCCTGCAGCAGATGAAGAATCAAAACCTAAAGACCGGAATTGGATCGATCACAAAACCAAAGAAGAACTCGAAGATCTAGAAGATGATATAGATGATGATCGATTTCTCCAAGAATACAGGAGACTTAGGTTAGCAGAGATGAAGCGAGTTGTGAAAATTGCAAAGTTTGGTTCGATCATACCAATTTCTGGATCCGATTTTGTGCGGGAGGTATCACAAGCTCCATCAGATGTGTGGGTGATTGTTATGTTATACAAAGATGGGTACCCAGAATGTGGTTTACTAATGCAATGTTTAGAAGAACTCGCAACAATGTATCCATCAACAAAGTTTGTTAAAATCATCTCAACCGATTGCATTCCTAATTATCCGGATCGTAATCTCCCGACTGTATTGGTTTATAATAATGGTGCTGTGAAGGCAAATTATGTTGGTTTACATACATTTGGAAGAAGATGCACTCCCGAAGGTGTTGCTATTGTTTTATGCCAATCAGATCCTGTGCTTAATGATGGACAGAGTGGAGGTGAAGCTTCTAGAGAAGCTGTTCTTGAAGGAGTGAGAAAACGGTATATCGAAAAAGTGATAACACAACATGAAGATGATGATGATGATGGGTCTGCAAGTGACTAG 756 40.34 MADYHFVYKDVEGSSTQWDDIQRKLGNLPPKPPAFKPDPFSPAADEESKPKDRNWIDHKTKEELEDLEDDIDDDRFLQEYRRLRLAEMKRVVKIAKFGSIIPISGSDFVREVSQAPSDVWVIVMLYKDGYPECGLLMQCLEELATMYPSTKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLHTFGRRCTPEGVAIVLCQSDPVLNDGQSGGEASREAVLEGVRKRYIEKVITQHEDDDDDGSASD 251
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre11g01638 251 PANTHER VIRAL IAP-ASSOCIATED FACTOR HOMOLOG 5 245 IPR051498 GO:0005737(PANTHER)|GO:0006457(PANTHER)
Stre11g01638 251 SUPERFAMILY Thioredoxin-like 16 205 IPR036249 -
Stre11g01638 251 Pfam Phosducin 56 186 IPR024253 -
Stre11g01638 251 CDD Phd-like-VIAF 16 206 - -
Stre11g01638 251 MobiDBLite consensus disorder prediction 42 57 - -
Stre11g01638 251 Gene3D Glutaredoxin 92 216 - -
Stre11g01638 251 MobiDBLite consensus disorder prediction 22 57 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre11g01638 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr11:90399294 Stre2g01821 Stre-Chr2:56651589 wgd