Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre11g01652 | ATGGAAGATGAATATGCAAAACTCATCAGGAGGATGAATCCACCCAGAGTTACAATCGACAACAAGTCTTCCCCGGATGCAACAGTTATCCAGGTTGAAAGTGTTAATAAGCATGGTATTCTACTGGAAGTTGTGCAATTTCTTGCTGATTTAGATCTCGTCATCAAAAAAGCATATATTTCATCAGATGGAGGATGGTTCATGGACGTGTTTAATGTTATATATCATGACGGAAGCAAAATTACAGATGAAAGAGTGGTCAGTTATATAAAAAAGGTGCTTGAAAAGGATGCATTTTATGTACCATCATTAACCGGTTCAGTTGGATTAAAACCGTCTGAAGATTACACAGTTATAGAACTAGTTGGAACCGACAGACCCGGATTATTATCCGAAGTATCCGCGGTTCTAACCGACCTCGGTTGTAACGTGGTCAATGCTGAAATATGGACCCACAATGCTCGAGCTGCAGCCGTGGTTCATGTAACCGACGATAAAACTAAATGTGCGGTTAAAGACCCGAAACGTCTTTTAACTATTAAGAAACTTCTTTGTAACATTCTCAAAGGAAACAATGATTTAAAGACTGCAAAAATGACACTTTCGACCCCGGGTTTCATGCACCGACAGAGAAGATTGCATCAAATTATGTTTGCTGAGCGGGATTACGAAAACGTTGAAAAAAATGATGAAAAGGAAAATAAGTTAAGAACGCGCGTTACGGTTTTAGATTGTGTTGAGAAGGATTATACGGTTGTTACAATGCATTGTAGAGATAGACCAAAGTTGTTGTTTGATACTATTTGCACTCTAACTGACATGCAATATGTTGTATTTCATGGAGTTGTTCATACAGGGAAAATGGAGGCTTTTCAGGAATATTACATTCGACATGTCGACGGGAGTCCGGTAAGCTCGGAAGCAGAGCGAGAGCGCGTGATGCAATGCCTTGAAGCCGCGATTGAGCGCAGGACGTCCGAGGCGTTAGAGCTAGAATTATGCACAGCAGATCGCGTTGGACTTCTTTCGGATATAACTCGAATCTTTCGAGAAAACAGTTTGTGTATAAAAAGAGCAGAGATCTCAACTGAAGGTGGAACAGCTAAAGACAAATTTTACGTGACCGACATGACGGCTAACAACCCCGTTGACCCAAAAACCATAGATTCTATTCGAAGACAAATCGGTCAACAAGCATCACTTCATGTTAGATGGAATTCTAGTCAATCATCAGACCCGCAACCTGAAGAAACAACAATCGGCTTTCTGTTTGGAAATCTTTTTAAATGCCGAACATTGAAATCAGTCGGTTCTTAG | 1317 | 40.55 | MEDEYAKLIRRMNPPRVTIDNKSSPDATVIQVESVNKHGILLEVVQFLADLDLVIKKAYISSDGGWFMDVFNVIYHDGSKITDERVVSYIKKVLEKDAFYVPSLTGSVGLKPSEDYTVIELVGTDRPGLLSEVSAVLTDLGCNVVNAEIWTHNARAAAVVHVTDDKTKCAVKDPKRLLTIKKLLCNILKGNNDLKTAKMTLSTPGFMHRQRRLHQIMFAERDYENVEKNDEKENKLRTRVTVLDCVEKDYTVVTMHCRDRPKLLFDTICTLTDMQYVVFHGVVHTGKMEAFQEYYIRHVDGSPVSSEAERERVMQCLEAAIERRTSEALELELCTADRVGLLSDITRIFRENSLCIKRAEISTEGGTAKDKFYVTDMTANNPVDPKTIDSIRRQIGQQASLHVRWNSSQSSDPQPEETTIGFLFGNLFKCRTLKSVGS | 438 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre11g01652 | 438 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 406 | IPR040217 | - | |
| Stre11g01652 | 438 | Pfam | ACT domain | 117 | 166 | IPR002912 | - | |
| Stre11g01652 | 438 | CDD | ACT-ACR-2 | 117 | 190 | - | - | |
| Stre11g01652 | 438 | SUPERFAMILY | ACT-like | 24 | 95 | IPR045865 | - | |
| Stre11g01652 | 438 | ProSiteProfiles | ACT domain profile. | 118 | 199 | IPR002912 | - | |
| Stre11g01652 | 438 | Gene3D | - | 113 | 182 | - | - | |
| Stre11g01652 | 438 | ProSiteProfiles | ACT domain profile. | 330 | 406 | IPR002912 | - | |
| Stre11g01652 | 438 | ProSiteProfiles | ACT domain profile. | 29 | 107 | IPR002912 | - | |
| Stre11g01652 | 438 | SUPERFAMILY | ACT-like | 325 | 399 | IPR045865 | - | |
| Stre11g01652 | 438 | SUPERFAMILY | ACT-like | 113 | 167 | IPR045865 | - | |
| Stre11g01652 | 438 | CDD | ACT-ACR-3 | 250 | 324 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre11g01652 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 158452 | Stre11g01652 | Stre4g01285 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr11:90598239 | Stre5g00491 | Stre-Chr5:14340790 | dispersed | |
| Stre | Stre-Chr11:90598239 | Stre4g01285 | Stre-Chr4:82936355 | wgd |