AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre11g01677 ATGGCGGCAGATAAGTTGAATAAGCGATCTAAAGTAAGCAATGATATTCCTTACACATATTGGGAGATGCAGAAAGTAAAGAGGAAAAAATATCCTCATTATGATTCGAATACAAAATCGCGTATTTCTCTCGAGTGGGATGACAAGAAGGAACGTGTTGTTTCTAAGAAGGAGCAGATAGGTATTGCACACAGAGAGTTGTCTCCGTTTCTTCCTTTTGTTGCTAATGACCAAAACGTCCTCGGTGATGTCTTTTCAGCTCCAACTGAATTATTTGAACTCCATAACTTGACCGGTTTGCTATCTTATGAGGTATGGCAAACGCATCTATCTGTTCAAGAACGAGAGTTTCTGACCCGATTTCTTCCTGAAGAAATCGATCCACTTAAAGCTGTTCATGAATTATTTGCTGGAAATAATTTCTGCTTTGGAAATCCATTTTCAAAATGGGGTGCTTCAGTATGTTCAGGTGAATATCATCCCGATTCCATTCTCCTTCAAGAACAACGTAACAAGGCTAACAGGATAGCATATTATTCAGAATTGCGCGAATACCATACTAAAATGATAGGGAGTCTTCAATCGTGGAAGGAAAGATGGACATTATCCATGAATCCGGATAAATTTATGCAAAAATCACTAAGGCCCAATAAGGAATCTCATAAAAGTGGACCCTCACATGAGATTAATTTACAAAATGGTCCTCAACATGATTTATATGCAACATCTGGTTCTTGTTCATGGGATGCTGATGAGAAATCATACAATTGCGACAGTCCAGATTTATCAGCTAGCAACAGGGAAACTGTAGTAAGTGCTTCTAGAACAGATTTGGGGAACAAGTATTATAATTCATCTGGTGGGAAATCGGTAACAAGACCTAAAAAAGGAGATAAAGTACGCAAGCTTAATATAGAGAGTGGTGATGGTGCCAAATACATGTCATACATAAAGGTTAGCAAGGAGCAGCATGAACGAGTTAAAAGCAGTATGAAACAGTTTAACAATAGTATCCAACAAAAGTCTCTTAATCTTGTTATAGGAAATCTCGACGGTTTCTGTGTTCAACCGTATGAAGTGTTTGAGGAAGAAGAGAGACAGAAGTTGCATGACCACTGGTTGCGTTTGGCAAAGATAGATCTCCCTGCAGGCTTTGAGAATTGGAAAAGTTGGCAATCTGTCAAGTTGCAAGTTACAAACTCTTTGAGGAAAGAAATGGAAGATAAATGGAAGACAAATGATGCATCTGTTTTAAATTTGTATGATAATCAGGATGATGAGTTCATAATCGACGGTCAGGATGAAGAGCAACACACTGATGGAGAAACAAATGATGTACTTTTAATTGAATTAGAGGATAACATGGAACAACAAACCGGTATTTCAATGTATCAATCAGAAGCAGATCTCAACACCGAAAACCATGATCCTGCAAGCAATTCAAGTCAAGATTCAATGCAACAAAACGGTATTTCAATCCATCGGTCAGAAGCAGATCTCAATCTTGAATTTCACGATCCTACAAACGAGTCAAGTCAAGATTCTGACCCGACTCAAATCACCTTACATAATAACACCCAAAACTTCTGTTCTATCGCCATCAACACCACTAGTGATGTCATAACAGAATCAGATACTTTTCCCTCCAGTCTCGTTGATTATCCCGATAATATAAATCATCATCCTGATGTTTCTGGCGGTGAACAGTTTCCTCTGCCATCTGCCGCCAATGAAATATGGCCACTAGCCACCTTACCAAATGTGTACTATCAACCGACATCTATATCCCAAGATTACCCTTCGGTTAGTCAATCGAGTTTTCTCCACCGACGATCCGACGGTGGAGATTCGTTCTTTAATCCTTACGCTAATCAAGACCGTAACGAGTTACCTCTACATTCCCTTTTCAAAGATCCTGTTAATTCTCATTATCTGGGACCCAATCAATTTTCGATTAATTTAAACTCGTCCAATTTAAACTCATCCTCACCGTTAGATCCAAGATTAAACATCCAACAAAATATATACACAGATGGCGCGAGTCGGTTTCATATTCCAAGAGAAGAACATCTTTTGCCACTGGATCAGGTTCATAGTTGGCCCGCGAATGGTGTTGTTAACCTCCCAATGTCTGGACCGGTTTCTCAACGGTTGAGTCAAAGCTGGTTTTCCGATGATGACGTGGCACGTGACGTATGGTCAACCGGTGTAGTCCCGAACCATGACATTGGGACTGGTGGTCAGGTGGTGGACGAGAGCTTATATAGTGTTTTATCCGAGTGTAACGGGTTGCGTTCGGGTGGTCATTATGGTTCAACTGAGATGATTCAACCAGGGAGCTTTTTAGAGGTGGGACGTGAATCGGTTCCGTCTACAACTGCCAACGGTGTGCCGCCTCGAGCCGCTAGACAGTCGGGTTTGAACTACATGAGTGGGAATGAAGCTCAATTAGGGTGGATGAACTTGCCACGTGGATTGCAGGATAGTGGGGGGAAATCATATGCAAGGTTATGGAATGATAAAGATTTAGGATGA 2535 40.75 MAADKLNKRSKVSNDIPYTYWEMQKVKRKKYPHYDSNTKSRISLEWDDKKERVVSKKEQIGIAHRELSPFLPFVANDQNVLGDVFSAPTELFELHNLTGLLSYEVWQTHLSVQEREFLTRFLPEEIDPLKAVHELFAGNNFCFGNPFSKWGASVCSGEYHPDSILLQEQRNKANRIAYYSELREYHTKMIGSLQSWKERWTLSMNPDKFMQKSLRPNKESHKSGPSHEINLQNGPQHDLYATSGSCSWDADEKSYNCDSPDLSASNRETVVSASRTDLGNKYYNSSGGKSVTRPKKGDKVRKLNIESGDGAKYMSYIKVSKEQHERVKSSMKQFNNSIQQKSLNLVIGNLDGFCVQPYEVFEEEERQKLHDHWLRLAKIDLPAGFENWKSWQSVKLQVTNSLRKEMEDKWKTNDASVLNLYDNQDDEFIIDGQDEEQHTDGETNDVLLIELEDNMEQQTGISMYQSEADLNTENHDPASNSSQDSMQQNGISIHRSEADLNLEFHDPTNESSQDSDPTQITLHNNTQNFCSIAINTTSDVITESDTFPSSLVDYPDNINHHPDVSGGEQFPLPSAANEIWPLATLPNVYYQPTSISQDYPSVSQSSFLHRRSDGGDSFFNPYANQDRNELPLHSLFKDPVNSHYLGPNQFSINLNSSNLNSSSPLDPRLNIQQNIYTDGASRFHIPREEHLLPLDQVHSWPANGVVNLPMSGPVSQRLSQSWFSDDDVARDVWSTGVVPNHDIGTGGQVVDESLYSVLSECNGLRSGGHYGSTEMIQPGSFLEVGRESVPSTTANGVPPRAARQSGLNYMSGNEAQLGWMNLPRGLQDSGGKSYARLWNDKDLG 844
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre11g01677 844 MobiDBLite consensus disorder prediction 213 236 - -
Stre11g01677 844 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 88 199 IPR044867 -
Stre11g01677 844 CDD DEUBAD-NFRKB 90 196 - -
Stre11g01677 844 PANTHER NFRKB-RELATED 1 491 IPR024867 GO:0031011(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre11g01677 - -