Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g01850 | ATGGGAGAAACCAAATCGTCATCAGATAACAGATTGAAACCATCATCAAAGTATTCTGATGAGAATCAAATGCCATTAAAGTGTAGGAACAACAATGTACAGTCGAATTTGAAGCCCAGATCGATCTGGGGTTCCAACATTGTGAAAGGGTTTTCAGCTGATAAGAAGACCAGATCCCAACAAATGGCGAAGAAATCACAACAACCACCTCAAACCAATCTCTCCAACACGAATGTGAAAAACCCTTTAGTTCTTAATCGTGCTAAACGGTCTCTGATTGGAGATCTATCATGTTCTGTCACTGCTACTCAAGTTTATCCTCAAGGGGTTCATCATCATTGTGATCAGAACCAGCGGCTGTATAAATCATCATCTTCTTCAGGTTCTCGTGATCTGTTTGCTGAGCTTGATCATCTCAGAAGCTTGCTTCAAGAATCTAAAGATAGAGAAGCTAAATTGCAGGCTGAGTTGTGTGATTTTAAGAAGAAAAATCTGCAGGCTTTGGAGCTTGAACGAACAGTTGAATTAAAGAGTAGGTCAATTGATGCTCTTAAAAGCAAAATTGATATGTTGGAATCAGAAAACACCAGTCTTTCTGAGCAGTTGCAAGAGAATATTAAAAAGGGGTTTGTTAATAGTGTTGAGGTTGATGTTCTTAAGTTGAGGAGGCTGAATGCTGAGCTTCATCTTCAAAAAAGAAATCTTTGTTGCAGAATTTCTTCAATGGAGTCAGAACTAGCTGCCCTTGCTAAAGATTCTGAGAATGAATTTGTCAAGAAGATGAAAACGGAGGCATCTATGTTAAGACAAACAAATGAAGATTTATGTAAACAAGTTGAAGATCTACAAGTAAGCCGATTGAACGAGGTTGAGGAGCTTGTATATCTTAGATGGGTTAATTCTTGTCTTAAAAATGAGTTACAAAATTCAGCTGAAATGACATCAAGTCCAGCTGCTGTTGAGTGGCTCAATGGTTGTATATCAAGTGATGAACACGGAAATAAATTAAATTTGGTTAGAAAAATGACAAAATGGCCTGTTTTAGATGAATATAAACTAAATCTTGGTTGGTCAGAAGGAAGAAGGCATTCAATAAGTGGATCAAATTGCTGTCAGGAAGATCCGGTGGTGAATAAACGAAGACAATCTGATGGTTTTATAGAAATGGACGGTGTAGATGATCTGAAAGGGTCACAATCGCGTGAAGCTACAAAACTGAAAGCATTTTTGGATGTTGAAAAACGGGCGTTGCGTGTTCCTAATCCTCCTCCGAGACCTTCTAGTTTTAGTTCTAAGGAACATACAGAGGTTACTAGTCAAGCACGACCACCGCCGCCGCCGCCACCTCCACCGCCTCCGCTGAAGTTTCATGGAAGAAGTAATGGCGGTGGGGTTGTTCAAAGAGCTCCAGAAGTGGTTGAGTTTTATCATTCACTTATGAAAAGGGACTCTAGAAAAGATTCCTTAATATGTGATGCTGTAGATGTCAATAATGTCAGAAATAGTATGATTGGTGAAATTGAAAACCGGTCATCACATTTGCTTGCTATAAAGGAAGATGTTGAGACTCAAGGGGAATTTGTGAATTCTTTAATACGCGAGCTCAACAATGCTGTTTATCCAGATATAGAAGATGTCGTGGCTTTTGTGAACTGGTTGGATGATGAACTCTGCTTTCTTGTGGATGAGAGGGCTGTGCTGAAACACTTTGATTGGCCGGAGAAGAAAGCAGACACATTAAGAGAGGCAGCATTTGCATATCTGGATTTAAACAAGTTGGAGCATGAAATTTCAAATTACAAAGACAATTTCCACATGCCATGTGATTTGGCATTGAAAAAAATGGTTTCCTTGTCTGAGAAGATGGAGCGTATTGTTTATAACCTTCTTAGAACAAGAGATCCCTTGATGCGTAATTGCAAAGAGTTTCATATTCCCACAGATTGGATGCTTGATTCAGGAATATTAAACAAGATTAAGCTGGGATCAGTTAAATTGGCAAAGAAATATTTGAGAAGAGTCGCTACAGAAATTCAAACGAAAGGAATATCAGAGAAAGATTCTTCAATGGACTATATGCTTCTTCAAGGAGTGAGATTCGCGTTCCGTATTCATCAGTTTGCTGGTGGATTTGATGTTGATACAATGCATGCGTTTGAGGAGCTTCGCAATGTGGCTCTTATTTTAAACAAAAAGTAG | 2199 | 38.84 | MGETKSSSDNRLKPSSKYSDENQMPLKCRNNNVQSNLKPRSIWGSNIVKGFSADKKTRSQQMAKKSQQPPQTNLSNTNVKNPLVLNRAKRSLIGDLSCSVTATQVYPQGVHHHCDQNQRLYKSSSSSGSRDLFAELDHLRSLLQESKDREAKLQAELCDFKKKNLQALELERTVELKSRSIDALKSKIDMLESENTSLSEQLQENIKKGFVNSVEVDVLKLRRLNAELHLQKRNLCCRISSMESELAALAKDSENEFVKKMKTEASMLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNSCLKNELQNSAEMTSSPAAVEWLNGCISSDEHGNKLNLVRKMTKWPVLDEYKLNLGWSEGRRHSISGSNCCQEDPVVNKRRQSDGFIEMDGVDDLKGSQSREATKLKAFLDVEKRALRVPNPPPRPSSFSSKEHTEVTSQARPPPPPPPPPPPLKFHGRSNGGGVVQRAPEVVEFYHSLMKRDSRKDSLICDAVDVNNVRNSMIGEIENRSSHLLAIKEDVETQGEFVNSLIRELNNAVYPDIEDVVAFVNWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFAYLDLNKLEHEISNYKDNFHMPCDLALKKMVSLSEKMERIVYNLLRTRDPLMRNCKEFHIPTDWMLDSGILNKIKLGSVKLAKKYLRRVATEIQTKGISEKDSSMDYMLLQGVRFAFRIHQFAGGFDVDTMHAFEELRNVALILNKK | 732 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g01850 | 732 | Coils | Coil | 583 | 603 | - | - | |
| Stre1g01850 | 732 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 443 | 596 | - | - | |
| Stre1g01850 | 732 | PANTHER | PROTEIN CHUP1, CHLOROPLASTIC | 34 | 724 | IPR040265 | GO:0009658(PANTHER)|GO:0009707(PANTHER) | |
| Stre1g01850 | 732 | MobiDBLite | consensus disorder prediction | 7 | 39 | - | - | |
| Stre1g01850 | 732 | MobiDBLite | consensus disorder prediction | 417 | 463 | - | - | |
| Stre1g01850 | 732 | Coils | Coil | 258 | 278 | - | - | |
| Stre1g01850 | 732 | MobiDBLite | consensus disorder prediction | 440 | 456 | - | - | |
| Stre1g01850 | 732 | Coils | Coil | 174 | 208 | - | - | |
| Stre1g01850 | 732 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Stre1g01850 | 732 | Coils | Coil | 136 | 156 | - | - | |
| Stre1g01850 | 732 | MobiDBLite | consensus disorder prediction | 54 | 79 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g01850 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:47101441 | Stre1g03469 | Stre-Chr1:116380089 | dispersed | |
| Stre | Stre-Chr1:47101441 | Stre1g01853 | Stre-Chr1:47199121 | proximal | |
| Stre | Stre-Chr1:47069289 | Stre1g01850 | Stre-Chr1:47101441 | tandem |