Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04047 | ATGGAACTCACACGCCATCTGCAACCACTACTCCTTGTCTTCCTTTTCTCCGTCGTCACCTCCGCCCACTACTCCGATGACCATGACTCCACCCTCCAAATCTCCACCACCAAACCACCGCTTTCATGGCCGGAGACTGTCCTTCAAATGCAAACCGACGACCACATTCGCCTCACCTATCTCTCCAGCTTAGTCGCCGGCCGGTCTTTTGTCCCCATCGGCTCCGGCAGACAGGTTATACAAAGCCCTACTTACGTCGTCAAGGCTAAGATTGGCACACCGGCTCAGACCGTGCTTATGGCGCTTGATACCAGCACCGACCTGACCATGGTTCCGTGCACCGGCTGCGCCGGTTGTAGCTCTACACCCTTTGCTTTTGCCAAATCTGTCACTTTCAAGTCTCTTAATTGCGCTGCTGCACAATGCAAGCAGGTGCAAAACTCAAACTGTCTAGGAACCACTTGCTTGATGAACATGACATACGGAGCCTCATCTATAGCCGCTAACTTGGCTCAAGACAACATAACCCTAGCCACCGACTCAGTCCGCGGCTACAATTTCGGTTGCATTCAAAAGCTGTAG | 582 | 52.75 | MELTRHLQPLLLVFLFSVVTSAHYSDDHDSTLQISTTKPPLSWPETVLQMQTDDHIRLTYLSSLVAGRSFVPIGSGRQVIQSPTYVVKAKIGTPAQTVLMALDTSTDLTMVPCTGCAGCSSTPFAFAKSVTFKSLNCAAAQCKQVQNSNCLGTTCLMNMTYGASSIAANLAQDNITLATDSVRGYNFGCIQKL | 193 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04047 | 193 | SUPERFAMILY | Acid proteases | 82 | 191 | IPR021109 | - | |
| Stre1g04047 | 193 | PANTHER | ASPARTYL PROTEASES | 49 | 190 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Stre1g04047 | 193 | Gene3D | Acid Proteases | 69 | 192 | IPR021109 | - | |
| Stre1g04047 | 193 | CDD | pepsin-like | 85 | 190 | IPR034164 | - | |
| Stre1g04047 | 193 | ProSiteProfiles | Peptidase family A1 domain profile. | 85 | 193 | IPR033121 | - | |
| Stre1g04047 | 193 | Pfam | Xylanase inhibitor N-terminal | 85 | 191 | IPR032861 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04047 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:125385305 | Stre6g02832 | Stre-Chr6:91150226 | dispersed | |
| Stre | Stre-Chr1:125385305 | Stre11g02201 | Stre-Chr11:101265203 | transposed |