Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04055 | ATGCATTCATTCGGGTACAGAGCCAACGCTTTGCTCACTTTTGCCATTACAATACTTGCTGTAATGTGCGCAATCGCATCGGTCTCCGACAATTTCAGTTCTCCTTCTCCTACATCTCAAGTTCAGGTATCTGTTTCTCTCTGTTTGAACATCAATTGGTTCCGGAATAAGCCAGACGGCGACGATGAGGTCAGCATGACAATGAACATATCAGCAAATTTACAATCATTATTTACATGGAATACAAAACAGGTTTTTGTCTTTCTGGCAGCTGAGTATGAAACGCCACAGAATGCACTAAATCAGGTATCCTTGTGGGATGGAATCATTCCGGCAAAAGAGCATGCAAAGTTCAACATCCATACAACTAACAAATACCGTTTTGTAGATCAGGGAAGTAATTTACGGGGAAGAGATTTTAACATGACATTGCATTGGCATGTGATGCCCAAAACTGGGAAGATGTTTGCTGACAAAATAGTTATGACCGGATTTAGGTTACCTCAATCATATCGGTGA | 519 | 41.04 | MHSFGYRANALLTFAITILAVMCAIASVSDNFSSPSPTSQVQVSVSLCLNINWFRNKPDGDDEVSMTMNISANLQSLFTWNTKQVFVFLAAEYETPQNALNQVSLWDGIIPAKEHAKFNIHTTNKYRFVDQGSNLRGRDFNMTLHWHVMPKTGKMFADKIVMTGFRLPQSYR | 172 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04055 | 172 | PIRSF | SPC3 | 1 | 172 | IPR007653 | GO:0005787(InterPro)|GO:0006465(InterPro)|GO:0016020(InterPro) | |
| Stre1g04055 | 172 | PANTHER | MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22-23 | 1 | 172 | IPR007653 | GO:0005787(PANTHER)|GO:0005787(InterPro)|GO:0006465(InterPro)|GO:0006465(PANTHER)|GO:0016020(InterPro)|GO:0045047(PANTHER) | |
| Stre1g04055 | 172 | Pfam | Signal peptidase subunit | 1 | 169 | IPR007653 | GO:0005787(InterPro)|GO:0006465(InterPro)|GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04055 | K12948 | signal peptidase complex subunit 3 [EC:3.4.-.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:22034744 | Stre1g04055 | Stre-Chr1:125448766 | dispersed | |
| Stre | Stre-Chr1:125448766 | Stre7g01785 | Stre-Chr7:82444732 | transposed |