AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04067 | ATGGGAGAGAATTCAGGTTACAAGCATTATGTAGCAGGATTGGTCTCAGGTGTTTCAATGGTGATTGTTGGTCATCCTTTCGACACTGTTAAGGTGAAGCTTCAGAAACATAATACAGAAGCTAATGGACTCAAGTACAGAGGTGGATTTCATTGTACAACTAGGATATTGAAGACCGAAGGAGTAAGAGGATTGTACCGAGGCGCAACACCATCTTTTGTGGGAATGGCCATTGAAAGTTCACTTGTTTTTGGTATTTATTCCCAAACAAAACAAGCACTGCAGGGAGGAGATTTTAGCAAAAAGCCGGAGCCCCATATAATAATTCCATCAGCAGCTTTTGCTGGATCCATTATCAGCTTCGTATTGTGTCCATCAGAGTTGGTCAAGTGTAGGATGCAAATTCAAGGTACTGATTCTGTGGTTCCAGCCTATCGTAAGTACAGTGGTCCTCTTGATTGTGCGGTTCAGACTGTAAAAACTGAAGGGTTTAAGGGTCTGTTTAGGGGAGGTGTCGCAACATTTTTAAGGGAATCTATTGGAAATGCTGTATTTTTTAGTACATACGAGTATTTGAGGCATTCTTTGCATTCGCAACTCAAAGATTCTTCATTCGAAAACACAAATTTGGTTGATGTTGGAATTGGAATTGTGAGTGGTGGTCTTGGTGGTATAGCGTTTTGGTCTGCTGTTCTTCCCCTGGATGTCGCAAAAACTATTATTCAAACTACACCAGACAAGAATTTAAGTAAAAATCCTTTCAAGATGCTAAAAACGATTTACAGAAGGTCTGGAGTTAGAGGATGCTACACAGGTTTAGGTCCAACAGTTTCGCGCGCATTCCCTGCAAATGCTGCTGCAATTGTTACATACGAAGCAGCTGCTAAACTCCTTGGAATTGTACGCGATTAA | 912 | 41.12 | MGENSGYKHYVAGLVSGVSMVIVGHPFDTVKVKLQKHNTEANGLKYRGGFHCTTRILKTEGVRGLYRGATPSFVGMAIESSLVFGIYSQTKQALQGGDFSKKPEPHIIIPSAAFAGSIISFVLCPSELVKCRMQIQGTDSVVPAYRKYSGPLDCAVQTVKTEGFKGLFRGGVATFLRESIGNAVFFSTYEYLRHSLHSQLKDSSFENTNLVDVGIGIVSGGLGGIAFWSAVLPLDVAKTIIQTTPDKNLSKNPFKMLKTIYRRSGVRGCYTGLGPTVSRAFPANAAAIVTYEAAAKLLGIVRD | 303 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04067 | 303 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 211 | 297 | IPR018108 | - | |
| Stre1g04067 | 303 | SUPERFAMILY | Mitochondrial carrier | 5 | 292 | IPR023395 | - | |
| Stre1g04067 | 303 | Pfam | Mitochondrial carrier protein | 5 | 96 | IPR018108 | - | |
| Stre1g04067 | 303 | Pfam | Mitochondrial carrier protein | 111 | 198 | IPR018108 | - | |
| Stre1g04067 | 303 | Pfam | Mitochondrial carrier protein | 217 | 298 | IPR018108 | - | |
| Stre1g04067 | 303 | Gene3D | Mitochondrial carrier domain | 1 | 110 | IPR023395 | - | |
| Stre1g04067 | 303 | FunFam | Mitochondrial amino acid carrier | 178 | 302 | - | - | |
| Stre1g04067 | 303 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 195 | IPR018108 | - | |
| Stre1g04067 | 303 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 6 | 298 | IPR050567 | GO:0000064(PANTHER)|GO:0006810(PANTHER)|GO:0022857(PANTHER)|GO:1990575(PANTHER) | |
| Stre1g04067 | 303 | Gene3D | Mitochondrial carrier domain | 111 | 301 | IPR023395 | - | |
| Stre1g04067 | 303 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 4 | 93 | IPR018108 | - | |
| Stre1g04067 | 303 | FunFam | Mitochondrial carrier protein | 1 | 107 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04067 | K28105 | solute carrier family 25 (mitochondrial basic amino acids transporter), member 29 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:125569940 | Stre9g00180 | Stre-Chr9:2936441 | dispersed | |
| Stre | Stre-Chr1:125569940 | Stre2g01352 | Stre-Chr2:33544841 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Stre9g01920 | . | 45 | 388 | Antiporters gene family | AT1G61800 | 77.273 | 0.0 | 548.0 | |
| Stre9g02220 | ACH,WGDA | 64 | 404 | Antiporters gene family | AT5G33320 | 68.406 | 9.05e-163 | 462.0 | |
| Stre9g00094 | WGDA | 1 | 818 | Antiporters gene family | AT4G23700 | 63.659 | 0.0 | 1025.0 | |
| Stre9g01764 | . | 15 | 576 | Antiporters gene family | AT3G19490 | 78.497 | 0.0 | 830.0 | |
| Stre9g01334 | . | 3 | 452 | Antiporters gene family | AT3G51860 | 68.282 | 0.0 | 573.0 | |
| Stre9g03067 | ACH | 33 | 563 | Antiporters gene family | AT5G64290 | 72.881 | 0.0 | 774.0 | |
| Stre9g02793 | . | 62 | 437 | Antiporters gene family | AT1G55730 | 74.005 | 0.0 | 571.0 | |
| Stre9g01337 | . | 3 | 443 | Antiporters gene family | AT3G51860 | 68.326 | 0.0 | 557.0 | |
| Stre9g01112 | ACH,WGDA | 34 | 436 | Antiporters gene family | AT2G38170 | 62.129 | 4.55e-169 | 480.0 | |
| Stre9g02787 | . | 62 | 437 | Antiporters gene family | AT1G55730 | 74.005 | 0.0 | 571.0 | |
| Stre9g00180 | WGDA | 30 | 283 | Antiporters gene family | AT1G79900 | 35.816 | 2.79e-43 | 148.0 | |
| Stre9g00621 | WGDA | 7 | 543 | Antiporters gene family | AT3G05030 | 69.944 | 0.0 | 770.0 | |
| Stre9g03060 | ACH | 33 | 563 | Antiporters gene family | AT5G64290 | 72.881 | 0.0 | 774.0 | |
| Stre1g04067 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 30.0 | 7.42e-37 | 131.0 | |
| Stre1g01831 | . | 1 | 406 | Antiporters gene family | AT5G46110 | 76.329 | 0.0 | 622.0 | |
| Stre1g01862 | . | 1 | 406 | Antiporters gene family | AT5G46110 | 75.061 | 0.0 | 608.0 | |
| Stre1g01035 | . | 7 | 545 | Antiporters gene family | AT1G08960 | 62.909 | 0.0 | 639.0 | |
| Stre1g04996 | . | 93 | 563 | Antiporters gene family | AT5G64290 | 69.639 | 0.0 | 685.0 | |
| Stre1g01696 | . | 65 | 566 | Antiporters gene family | AT5G17860 | 43.846 | 4.49e-138 | 412.0 | |
| Stre1g04337 | . | 23 | 539 | Antiporters gene family | AT2G47600 | 67.37 | 0.0 | 728.0 | |
| Stre1g02064 | . | 1 | 557 | Antiporters gene family | AT5G12860 | 79.965 | 0.0 | 854.0 | |
| Stre1g04913 | . | 93 | 563 | Antiporters gene family | AT5G64290 | 69.639 | 0.0 | 686.0 | |
| Stre1g01863 | . | 1 | 410 | Antiporters gene family | AT5G46110 | 76.923 | 0.0 | 627.0 | |
| Stre1g01814 | . | 55 | 801 | Antiporters gene family | AT3G52080 | 45.321 | 0.0 | 679.0 | |
| Stre1g04195 | . | 6 | 451 | Antiporters gene family | AT3G51860 | 62.971 | 0.0 | 521.0 | |
| Stre1g01364 | WGDA | 54 | 776 | Antiporters gene family | AT1G16380 | 39.373 | 6.57e-172 | 511.0 | |
| Stre1g04370 | ACH | 12 | 534 | Antiporters gene family | AT3G05030 | 63.048 | 0.0 | 665.0 | |
| Stre1g01832 | . | 1 | 410 | Antiporters gene family | AT5G46110 | 76.923 | 0.0 | 627.0 | |
| Stre10g01063 | . | 3 | 542 | Antiporters gene family | AT3G05030 | 74.444 | 0.0 | 825.0 | |
| Stre10g02721 | ACH | 67 | 566 | Antiporters gene family | AT5G17860 | 47.297 | 4.08e-166 | 482.0 | |
| Stre10g01091 | WGDA | 3 | 542 | Antiporters gene family | AT3G05030 | 74.444 | 0.0 | 825.0 | |
| Stre10g00645 | ACH | 1 | 795 | Antiporters gene family | AT4G23700 | 63.204 | 0.0 | 999.0 | |
| Stre10g01507 | . | 4 | 656 | Antiporters gene family | AT5G25430 | 65.596 | 0.0 | 897.0 | |
| Stre10g01025 | . | 3 | 417 | Antiporters gene family | AT5G17630 | 69.231 | 0.0 | 550.0 | |
| Stre10g01820 | . | 52 | 584 | Antiporters gene family | AT2G19600 | 81.262 | 0.0 | 852.0 | |
| Stre11g00220 | . | 83 | 406 | Antiporters gene family | AT5G46110 | 79.341 | 0.0 | 548.0 | |
| Stre11g02173 | . | 37 | 846 | Antiporters gene family | AT5G37060 | 41.912 | 0.0 | 662.0 | |
| Stre11g01149 | WGDA | 1 | 384 | Antiporters gene family | AT5G13490 | 75.13 | 0.0 | 572.0 | |
| Stre4g02352 | ACH | 1 | 702 | Antiporters gene family | AT2G47160 | 73.907 | 0.0 | 1063.0 | |
| Stre4g00579 | WGDA | 1 | 384 | Antiporters gene family | AT5G13490 | 75.389 | 0.0 | 577.0 | |
| Stre4g02204 | . | 6 | 302 | Antiporters gene family | AT5G17400 | 73.737 | 9.86e-163 | 453.0 | |
| Stre4g02631 | ACH | 1 | 296 | Antiporters gene family | AT1G79900 | 68.301 | 2.67e-145 | 409.0 | |
| Stre4g00168 | . | 13 | 479 | Antiporters gene family | AT3G05030 | 32.784 | 4.40e-54 | 189.0 | |
| Stre4g02594 | ACH | 107 | 669 | Antiporters gene family | AT1G15460 | 69.474 | 0.0 | 829.0 | |
| Stre2g02703 | . | 19 | 266 | Antiporters gene family | AT3G13320 | 62.598 | 1.53e-107 | 318.0 | |
| Stre2g02482 | ACH | 10 | 672 | Antiporters gene family | AT1G15460 | 64.253 | 0.0 | 876.0 | |
| Stre2g00925 | . | 1 | 304 | Antiporters gene family | AT5G17400 | 36.129 | 1.20e-62 | 199.0 | |
| Stre2g06051 | ACH,WGDA | 1 | 387 | Antiporters gene family | AT5G54800 | 71.638 | 0.0 | 551.0 | |
| Stre2g02403 | ACH | 6 | 619 | Antiporters gene family | AT1G15460 | 68.078 | 0.0 | 875.0 | |
| Stre2g02608 | . | 65 | 566 | Antiporters gene family | AT5G17860 | 44.574 | 1.01e-143 | 426.0 | |
| Stre2g05696 | ACH | 1 | 687 | Antiporters gene family | AT3G62270 | 75.971 | 0.0 | 1080.0 | |
| Stre2g02320 | WGDA | 64 | 402 | Antiporters gene family | AT5G33320 | 64.14 | 4.60e-150 | 429.0 | |
| Stre2g02627 | . | 65 | 566 | Antiporters gene family | AT5G17860 | 43.284 | 8.10e-142 | 422.0 | |
| Stre2g01352 | ACH,WGDA | 30 | 283 | Antiporters gene family | AT1G79900 | 34.028 | 9.90e-43 | 147.0 | |
| Stre2g03299 | ACH,WGDA | 38 | 563 | Antiporters gene family | AT5G64290 | 76.46 | 0.0 | 811.0 | |
| Stre2g05698 | ACH | 1 | 404 | Antiporters gene family | AT5G33320 | 65.356 | 8.82e-179 | 502.0 | |
| Stre2g02696 | . | 19 | 439 | Antiporters gene family | AT3G13320 | 68.458 | 0.0 | 593.0 | |
| Stre2g01394 | ACH,WGDA | 1 | 810 | Antiporters gene family | AT5G41610 | 63.158 | 0.0 | 992.0 | |
| Stre2g03305 | ACH | 92 | 563 | Antiporters gene family | AT5G64290 | 76.059 | 0.0 | 715.0 | |
| Stre2g05978 | . | 5 | 821 | Antiporters gene family | AT2G13620 | 68.176 | 0.0 | 1116.0 | |
| Stre2g02508 | ACH | 1 | 287 | Antiporters gene family | AT1G79900 | 64.983 | 1.18e-130 | 371.0 | |
| Stre2g03896 | ACH | 18 | 387 | Antiporters gene family | AT5G54800 | 75.597 | 0.0 | 552.0 | |
| Stre2g03937 | ACH | 2 | 521 | Antiporters gene family | AT5G55470 | 67.885 | 0.0 | 725.0 | |
| Stre2g00888 | WGDA | 14 | 545 | Antiporters gene family | AT3G05030 | 75.0 | 0.0 | 822.0 | |
| Stre8g00237 | . | 1 | 697 | Antiporters gene family | AT2G47160 | 80.481 | 0.0 | 1141.0 | |
| Stre8g00339 | ACH | 7 | 534 | Antiporters gene family | AT3G05030 | 62.991 | 0.0 | 677.0 | |
| Stre8g01837 | . | 21 | 554 | Antiporters gene family | AT5G51710 | 77.196 | 0.0 | 842.0 | |
| Stre3g02647 | ACH | 63 | 567 | Antiporters gene family | AT5G17860 | 47.945 | 4.82e-162 | 471.0 | |
| Stre3g02051 | . | 9 | 665 | Antiporters gene family | AT5G25430 | 63.086 | 0.0 | 874.0 | |
| Stre3g01298 | WGDA | 28 | 563 | Antiporters gene family | AT5G64290 | 77.052 | 0.0 | 815.0 | |
| Stre3g00913 | WGDA | 13 | 542 | Antiporters gene family | AT3G05030 | 73.07 | 0.0 | 794.0 | |
| Stre3g02595 | WGDA | 1 | 383 | Antiporters gene family | AT5G13490 | 75.718 | 0.0 | 558.0 | |
| Stre5g02280 | ACH,WGDA | 1 | 261 | Antiporters gene family | AT5G54800 | 63.929 | 3.68e-109 | 321.0 | |
| Stre5g01028 | . | 33 | 1142 | Antiporters gene family | AT2G01980 | 63.369 | 0.0 | 1361.0 | |
| Stre7g01740 | . | 3 | 433 | Antiporters gene family | AT3G51860 | 61.379 | 1.92e-168 | 479.0 | |
| Stre7g02256 | . | 43 | 379 | Antiporters gene family | AT3G01550 | 63.609 | 7.15e-150 | 429.0 | |
| Stre7g02924 | WGDA | 1 | 383 | Antiporters gene family | AT5G13490 | 75.457 | 0.0 | 558.0 | |
| Stre7g02255 | . | 43 | 379 | Antiporters gene family | AT3G01550 | 65.089 | 1.32e-157 | 447.0 | |
| Stre7g02873 | . | 1 | 831 | Antiporters gene family | AT3G53720 | 64.497 | 0.0 | 1014.0 | |
| Stre7g01982 | WGDA | 2 | 776 | Antiporters gene family | AT1G16380 | 38.023 | 0.0 | 537.0 | |
| Stre6g01053 | . | 15 | 803 | Antiporters gene family | AT1G06970 | 33.835 | 2.98e-161 | 487.0 | |
| Stre6g00867 | ACH | 12 | 526 | Antiporters gene family | AT5G55470 | 69.126 | 0.0 | 746.0 | |
| Stre6g01676 | ACH,WGDA | 37 | 440 | Antiporters gene family | AT2G38170 | 61.823 | 4.82e-170 | 483.0 |