Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04068 | ATGGGTGTACCGGAAATTGTTCAAGTTGCTCGAAATTTTTCTGTCATGATCAGAGTTCATGGCCCTGACCCAAAAGGATTAAAGATGAGAAAACATGCTTTCCATCATTACATCTCAGGAAAAACCACTATTTCATCATCTGGAGTCATGTTGCCTAAACAAATATGCAGTGAACCAGTGCAATTGGTTTTAACAGTTGCTTCAATAGTTGAGCCATTTCTTTCATCAGAACACAGGGATCACTTGTCTCAGACTGACGAGGTCAAACCAGAGTTGATTCCTGGTGCGCAGATTGATATAATGGTAGAGGGGAATCATTCTACACCGAATGACAATGAAACTCAATGGCTACCTGCTGAACTTATAGCTTTGCTCGACATTCCAGCTTCATTTGTCGCGCTCCAATCTTTAATCGGGTCTTCTGGGTCATTGGATCATGGTTGGGAAGTTGGTTGGTCGTTGGCCTCTTATAATGATGGTCAACAACCGTATATTGATCCTACAAAAAAAGAGGCTCCACGCTCTACAACCAAAAGTCAACTCGAATTGGTTGACTCAAGTCTAAATGCAAAGTTGGCAACTCGAATTGCTATACTGAGACTTGGTTCAAGAAGTTTTGAGGATCTGCCAAAGCTGAAAACATCACCCCAAAATAAGAGGGGTGATTTTATCCTTGCAATTGGTGCTCCATTTGGTGTCTTATCTCCTGCTCACTTTTGTAACAGCATATCAGTTGGTTATGTTTCCAACTACTACCCTCCTAATCCCCAAAAAGCGTCATTGCTGATGGCAGATATTCGGTGTCTTCCTGGAATGGAAGGGAGTCCAGTTTTTGGAGAAGAATCAGATATTGTTGGTATTCTTACAAGGCCCCTCAGACAGAGGGGTAGTGGTGCTGAAGTCCAGCTTGTAATCCCATGGGAAGCCATTATAAACTCATGTTCTAGATTCTTCTCACCTAACACAACCAAATTAAAAGATTCATCAAAACACAATCACGGGTCCCGCGTAATCCCTCCAAATCCTGCTGAGCTGGCAACGTCTTCTATATGTCTAATCACCATCAACGATGGCGTATGGGCATCTGGTATTGTACTCAACAAACATGGACTTATTCTCACAAACGCTCACCTTCTCGAACCATGGAGGTTTAAGAAAACAACCACCATTGAGAATAATAATAAAACCATGTCAAATATCTTTTTTACCCCTTCAGATGAAACAGAAGATGCAAAGGCTTTGACCGGTCAATCTAAGATGTATCATCAAAGTATACGCGTTCGTGTCGATTACTTGGATCGTTGGGTTTGGTGTGATGCGCGTGTAGTTTATGTTTCAAAAGGTCCTTTAGACATCGCGGTATTGAAACTTGAATTTGTGCCGGATAAACTTCAACCGATTGTTATGGATTTCACTTGTCCCTCTCTTGGATCTAAGGTTTATGTTACAGGACACGGTCTTTTTGGACCTCGTTGTGATCTTCTTCCATCAACTTGTGTTGGAGTGGTGGCAAAAGTAGTTAAATCACAGAAAGCTACCGGAAAAGGAGATTTACCCGCAATGATTGAAACAACCGCCGCCGTTCATCCTGGTGGTAGCGGTGGTGCGGTTCTTAACTCAGATGGTCACATGATCAGCCTTGTTACAAGCAATGCGAGGCACGGTGGAGGAACCGTTATACCTTATTTAAACTTCAGCATTCCATGTGCCGCATTAGAGCCTGTTTTCAACTTCTCAAAAGACATCAAGGATTTATCCATCTTGGAAGATCTTGATCGACCAAATGAACACCTCTCATCTGTATGGGCATTGATGCCATCGAAACCACGTGATGATGACATCAAAGATACAAAAGGTTCAAAATTCGCCAAATTTATAGCCGAAAAGAAATTTGTGAAACAAGCATCGCTGCCTGATAAAACGGGTCTCGGTTCTGCAAAACTTTTTCCCAGCAAGTTGTGA | 1962 | 42.2 | MGVPEIVQVARNFSVMIRVHGPDPKGLKMRKHAFHHYISGKTTISSSGVMLPKQICSEPVQLVLTVASIVEPFLSSEHRDHLSQTDEVKPELIPGAQIDIMVEGNHSTPNDNETQWLPAELIALLDIPASFVALQSLIGSSGSLDHGWEVGWSLASYNDGQQPYIDPTKKEAPRSTTKSQLELVDSSLNAKLATRIAILRLGSRSFEDLPKLKTSPQNKRGDFILAIGAPFGVLSPAHFCNSISVGYVSNYYPPNPQKASLLMADIRCLPGMEGSPVFGEESDIVGILTRPLRQRGSGAEVQLVIPWEAIINSCSRFFSPNTTKLKDSSKHNHGSRVIPPNPAELATSSICLITINDGVWASGIVLNKHGLILTNAHLLEPWRFKKTTTIENNNKTMSNIFFTPSDETEDAKALTGQSKMYHQSIRVRVDYLDRWVWCDARVVYVSKGPLDIAVLKLEFVPDKLQPIVMDFTCPSLGSKVYVTGHGLFGPRCDLLPSTCVGVVAKVVKSQKATGKGDLPAMIETTAAVHPGGSGGAVLNSDGHMISLVTSNARHGGGTVIPYLNFSIPCAALEPVFNFSKDIKDLSILEDLDRPNEHLSSVWALMPSKPRDDDIKDTKGSKFAKFIAEKKFVKQASLPDKTGLGSAKLFPSKL | 653 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04068 | 653 | FunFam | Glyoxysomal processing protease glyoxysomal | 473 | 585 | - | - | |
| Stre1g04068 | 653 | Gene3D | - | 340 | 472 | IPR043504 | - | |
| Stre1g04068 | 653 | SUPERFAMILY | Trypsin-like serine proteases | 340 | 576 | IPR009003 | - | |
| Stre1g04068 | 653 | Gene3D | - | 212 | 320 | IPR043504 | - | |
| Stre1g04068 | 653 | PRINTS | HtrA-DegQ protease family signature | 370 | 382 | IPR001940 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Stre1g04068 | 653 | PRINTS | HtrA-DegQ protease family signature | 518 | 535 | IPR001940 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Stre1g04068 | 653 | PRINTS | HtrA-DegQ protease family signature | 540 | 557 | IPR001940 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Stre1g04068 | 653 | FunFam | glyoxysomal processing protease, glyoxysomal-like | 215 | 319 | - | - | |
| Stre1g04068 | 653 | Gene3D | - | 473 | 584 | IPR043504 | - | |
| Stre1g04068 | 653 | PANTHER | SERINE PROTEASE-RELATED | 1 | 633 | IPR039245 | GO:0004252(InterPro)|GO:0004252(PANTHER)|GO:0005777(PANTHER)|GO:0005777(InterPro)|GO:0016485(PANTHER)|GO:0016485(InterPro) | |
| Stre1g04068 | 653 | Pfam | Trypsin-like peptidase domain | 361 | 545 | - | - | |
| Stre1g04068 | 653 | Pfam | Trypsin-like peptidase domain | 188 | 287 | - | - | |
| Stre1g04068 | 653 | SUPERFAMILY | Trypsin-like serine proteases | 193 | 312 | IPR009003 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04068 | K23012 | peroxisomal leader peptide-processing protease [EC:3.4.21.-] |