AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04068 ATGGGTGTACCGGAAATTGTTCAAGTTGCTCGAAATTTTTCTGTCATGATCAGAGTTCATGGCCCTGACCCAAAAGGATTAAAGATGAGAAAACATGCTTTCCATCATTACATCTCAGGAAAAACCACTATTTCATCATCTGGAGTCATGTTGCCTAAACAAATATGCAGTGAACCAGTGCAATTGGTTTTAACAGTTGCTTCAATAGTTGAGCCATTTCTTTCATCAGAACACAGGGATCACTTGTCTCAGACTGACGAGGTCAAACCAGAGTTGATTCCTGGTGCGCAGATTGATATAATGGTAGAGGGGAATCATTCTACACCGAATGACAATGAAACTCAATGGCTACCTGCTGAACTTATAGCTTTGCTCGACATTCCAGCTTCATTTGTCGCGCTCCAATCTTTAATCGGGTCTTCTGGGTCATTGGATCATGGTTGGGAAGTTGGTTGGTCGTTGGCCTCTTATAATGATGGTCAACAACCGTATATTGATCCTACAAAAAAAGAGGCTCCACGCTCTACAACCAAAAGTCAACTCGAATTGGTTGACTCAAGTCTAAATGCAAAGTTGGCAACTCGAATTGCTATACTGAGACTTGGTTCAAGAAGTTTTGAGGATCTGCCAAAGCTGAAAACATCACCCCAAAATAAGAGGGGTGATTTTATCCTTGCAATTGGTGCTCCATTTGGTGTCTTATCTCCTGCTCACTTTTGTAACAGCATATCAGTTGGTTATGTTTCCAACTACTACCCTCCTAATCCCCAAAAAGCGTCATTGCTGATGGCAGATATTCGGTGTCTTCCTGGAATGGAAGGGAGTCCAGTTTTTGGAGAAGAATCAGATATTGTTGGTATTCTTACAAGGCCCCTCAGACAGAGGGGTAGTGGTGCTGAAGTCCAGCTTGTAATCCCATGGGAAGCCATTATAAACTCATGTTCTAGATTCTTCTCACCTAACACAACCAAATTAAAAGATTCATCAAAACACAATCACGGGTCCCGCGTAATCCCTCCAAATCCTGCTGAGCTGGCAACGTCTTCTATATGTCTAATCACCATCAACGATGGCGTATGGGCATCTGGTATTGTACTCAACAAACATGGACTTATTCTCACAAACGCTCACCTTCTCGAACCATGGAGGTTTAAGAAAACAACCACCATTGAGAATAATAATAAAACCATGTCAAATATCTTTTTTACCCCTTCAGATGAAACAGAAGATGCAAAGGCTTTGACCGGTCAATCTAAGATGTATCATCAAAGTATACGCGTTCGTGTCGATTACTTGGATCGTTGGGTTTGGTGTGATGCGCGTGTAGTTTATGTTTCAAAAGGTCCTTTAGACATCGCGGTATTGAAACTTGAATTTGTGCCGGATAAACTTCAACCGATTGTTATGGATTTCACTTGTCCCTCTCTTGGATCTAAGGTTTATGTTACAGGACACGGTCTTTTTGGACCTCGTTGTGATCTTCTTCCATCAACTTGTGTTGGAGTGGTGGCAAAAGTAGTTAAATCACAGAAAGCTACCGGAAAAGGAGATTTACCCGCAATGATTGAAACAACCGCCGCCGTTCATCCTGGTGGTAGCGGTGGTGCGGTTCTTAACTCAGATGGTCACATGATCAGCCTTGTTACAAGCAATGCGAGGCACGGTGGAGGAACCGTTATACCTTATTTAAACTTCAGCATTCCATGTGCCGCATTAGAGCCTGTTTTCAACTTCTCAAAAGACATCAAGGATTTATCCATCTTGGAAGATCTTGATCGACCAAATGAACACCTCTCATCTGTATGGGCATTGATGCCATCGAAACCACGTGATGATGACATCAAAGATACAAAAGGTTCAAAATTCGCCAAATTTATAGCCGAAAAGAAATTTGTGAAACAAGCATCGCTGCCTGATAAAACGGGTCTCGGTTCTGCAAAACTTTTTCCCAGCAAGTTGTGA 1962 42.2 MGVPEIVQVARNFSVMIRVHGPDPKGLKMRKHAFHHYISGKTTISSSGVMLPKQICSEPVQLVLTVASIVEPFLSSEHRDHLSQTDEVKPELIPGAQIDIMVEGNHSTPNDNETQWLPAELIALLDIPASFVALQSLIGSSGSLDHGWEVGWSLASYNDGQQPYIDPTKKEAPRSTTKSQLELVDSSLNAKLATRIAILRLGSRSFEDLPKLKTSPQNKRGDFILAIGAPFGVLSPAHFCNSISVGYVSNYYPPNPQKASLLMADIRCLPGMEGSPVFGEESDIVGILTRPLRQRGSGAEVQLVIPWEAIINSCSRFFSPNTTKLKDSSKHNHGSRVIPPNPAELATSSICLITINDGVWASGIVLNKHGLILTNAHLLEPWRFKKTTTIENNNKTMSNIFFTPSDETEDAKALTGQSKMYHQSIRVRVDYLDRWVWCDARVVYVSKGPLDIAVLKLEFVPDKLQPIVMDFTCPSLGSKVYVTGHGLFGPRCDLLPSTCVGVVAKVVKSQKATGKGDLPAMIETTAAVHPGGSGGAVLNSDGHMISLVTSNARHGGGTVIPYLNFSIPCAALEPVFNFSKDIKDLSILEDLDRPNEHLSSVWALMPSKPRDDDIKDTKGSKFAKFIAEKKFVKQASLPDKTGLGSAKLFPSKL 653
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04068 653 FunFam Glyoxysomal processing protease glyoxysomal 473 585 - -
Stre1g04068 653 Gene3D - 340 472 IPR043504 -
Stre1g04068 653 SUPERFAMILY Trypsin-like serine proteases 340 576 IPR009003 -
Stre1g04068 653 Gene3D - 212 320 IPR043504 -
Stre1g04068 653 PRINTS HtrA-DegQ protease family signature 370 382 IPR001940 GO:0004252(InterPro)|GO:0006508(InterPro)
Stre1g04068 653 PRINTS HtrA-DegQ protease family signature 518 535 IPR001940 GO:0004252(InterPro)|GO:0006508(InterPro)
Stre1g04068 653 PRINTS HtrA-DegQ protease family signature 540 557 IPR001940 GO:0004252(InterPro)|GO:0006508(InterPro)
Stre1g04068 653 FunFam glyoxysomal processing protease, glyoxysomal-like 215 319 - -
Stre1g04068 653 Gene3D - 473 584 IPR043504 -
Stre1g04068 653 PANTHER SERINE PROTEASE-RELATED 1 633 IPR039245 GO:0004252(InterPro)|GO:0004252(PANTHER)|GO:0005777(PANTHER)|GO:0005777(InterPro)|GO:0016485(PANTHER)|GO:0016485(InterPro)
Stre1g04068 653 Pfam Trypsin-like peptidase domain 361 545 - -
Stre1g04068 653 Pfam Trypsin-like peptidase domain 188 287 - -
Stre1g04068 653 SUPERFAMILY Trypsin-like serine proteases 193 312 IPR009003 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04068 K23012 peroxisomal leader peptide-processing protease [EC:3.4.21.-]