AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04077 ATGAGCAGCTCGCAGTCGTCACACTCGCTAGCTTTCAGGGTGATGCGGTTATGCCGGCCGGCGTTCCATGCCGAAACCCCACTCCGATTCGACCTTTCCGATCTCATCGTCGGGGAGGATCTATTCGACGATCCGTCCGCCGGACCTCAGCTCCGGCGTCTCCTCCAATCTCAAACCACCACCATTGAATCCTCCACCGATCTCACCTACACTAATCGTTTCCTTCTTCGTGACGATCCGTCCGATGCAATGGGCCTTCCCGGTATGCTTGTTCTTCCTCAGTCATTCGGTGCCATATATCTTGGAGAAACATTTTGCAGCTATATAAGCATCAACAACAGCTCCAGTATTGAAGTGAGAGACATTATAATCAAGGCAGAAATACAAACAGAAAAACAGAGAATATTGCTTTTAGATACAACTAAATCACCAGTTGAAACAATAAGAGCAGGTGGACGCTATGATTTCATTGTCGAACATGATGTTAAAGAGCTTGGTGCACACACTCTGGTCTGCACTGCGCAATATAGTGATGGTGATGCGGAGCGCAAGTATCTCCCGCAATATTTCAAGTTTATGGTTTCAAATCCCCTTTCTGTCAGAACAAAGGTTCGTGTTGTGAAGGTACGAAACACATACTTGGAGGCTTGTTTAGAAAATAATACAAAATCAAATCTTTACATGGACCAAGTGGATTTTGAGCCTACTTCTAACTGGAGTGCAATATTATTAAGAGCCGATAGTCACCATTCTGAGAAAAGTATTTCTACAAGAGAGATATTCAAGCCACCGATTCTGATTAAATCTGGAGGTGGAATTCACAACTATCTTTACCAATTAAAATCATTATTGGATGAATCTGCACCAATGAAATTTGAGGGAAGTAATGTTCTTGGCAAACTTCAAATAACATGGCGAACAAATTTAGGTGAACCTGGGCGATTGCAAACGCAACAGATTGTTGGTAATAATCTTGTTGCGCAAAGAGAGATTGAACTGAAAGCAACAAAGGTGCCATCTGTCATCATCTTAGAAAAACCCTTTACAGTATGCTTTCGTCTCACAAATGTTACCGACAACAAACTTGGCCCATTTGAGGTTTTCTTATCTCTCCAAGATGAAAAATCTCTTTTTGGTATTGGGCTTAAAAAGATGGCTTTACCTCAAGTGGAGGCATTCAAATCTCTCGATTTTCAAATGAACTTAATACCCATGGAAGCTGGAATGCAGAAAATCAGTGGAATTACAGTTTTTAATACAACAGAGAAGAAAGGTTATGATCCATTGTCCGATATTGAGATTTTCGTTGATACGTGTTGA 1320 41.59 MSSSQSSHSLAFRVMRLCRPAFHAETPLRFDLSDLIVGEDLFDDPSAGPQLRRLLQSQTTTIESSTDLTYTNRFLLRDDPSDAMGLPGMLVLPQSFGAIYLGETFCSYISINNSSSIEVRDIIIKAEIQTEKQRILLLDTTKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTAQYSDGDAERKYLPQYFKFMVSNPLSVRTKVRVVKVRNTYLEACLENNTKSNLYMDQVDFEPTSNWSAILLRADSHHSEKSISTREIFKPPILIKSGGGIHNYLYQLKSLLDESAPMKFEGSNVLGKLQITWRTNLGEPGRLQTQQIVGNNLVAQREIELKATKVPSVIILEKPFTVCFRLTNVTDNKLGPFEVFLSLQDEKSLFGIGLKKMALPQVEAFKSLDFQMNLIPMEAGMQKISGITVFNTTEKKGYDPLSDIEIFVDTC 439
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04077 439 PANTHER UNCHARACTERIZED 1 436 IPR010378 GO:1990072(PANTHER)
Stre1g04077 439 Pfam Protein of unknown function (DUF974) 90 320 IPR010378 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04077 K20310 trafficking protein particle complex subunit 13
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:125666605 Stre6g03311 Stre-Chr6:98693389 dispersed