Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04079 | ATGGATCAGCAGCATATCCTCTACGATGAAGTTGAAGTAAACGGCAGCAAGACAGCATTGACTTTGTCCACCGACGGAATACTGCGGTGGTACGATCACGTCAACGTCCTTCGTTGCCTCTCTGTCGACGGTGAAGTTCTCGGAGTATCAATTGTCGGACAACAAATCATAATCAGGTCGTTTGTTGAGACTGATGGTTTCTGCTTTGCAATTTGCAATCGAGGTTTGACGAGGAAAAGCTTTGCATTCGAAGCATTATCGGAAAATTCATTACAGAATCTGTACGACAAGATCCAGGGATACATTGACACATTAGGCAGGCCAAAGAAGTTGTTTATATTTGTTAATCCATTTGGAGGAAGGAAATCCGCGTCCAAAATTTTTACCGATGATGTAAAACCTATACTCGAGGATGCTAATATCGAATATACGTTACAAGAAACTAAATATCAACTTCACGCAAAGGAAGTTTCTCATAGTTTGGATCTTACAAAGTACGATGGCATTCTTTGTGTCAGTGGAGATGGAATATTGGTTGAGGTTGTTAATGGATTGCTTGAAAGAGAAGATTGGCAAGTAGCACTCAAGATGCCTATTGGAGTCGTACCTGCAGGTACTGGAAATGGAATGATAAAATCTCTTCTAGATGCAGCTGGTCAACCATGTACCGTTGCTTATGCTATGCTTTCTGTAATTCAAGGGCATAAACGCTCTTTGGATGTAGCTACAATCTGGCAGGGAGAGGCTAGATTTTTTAGCGTCTTGATGCTTGCATGGGGTAAAATTAAAGTAGTTTCCTTTTACAAGCACAGTCTTTTATTTATTGATTTTTTTAATACTTGTAACTGGTTTCTGTTGTTTTTATTTTTATTTTTTGAAGGACTAATAGCTGATATAGATATAGAGTCTGAGCAGTATCGATGGATGGGAGGTGCTCGAATGGATATTTATGGTCTACAACGAGTTCTATCATTGCGGAAATATAATGGGTGTATTTCGTTTGTACCTGCTTCTGGATTTGAAGATGTAGGAGAACCAGCAAGTGTTGTTGTTGAACCTCTTAAAACTCGACACCATGGTTATGAGGGTCCAAAAGTTGATTTAGGGGGTTCAAGTTGGAGAAAGATTGATGGTCCGTTTGTTGGCGTTTGGCTTCAAAATGTTTCTTGGGGTTCTGAAAATGCCAAGGCTGCACCCGATGCTAAGTTTGATGATGGATATCTAGACTTGATTGTAATGCGCGAATGCCCGAAGTTAAGGTTGTTATCATTGATGTCTGAAATGAGCAACGGGCATTATGTAAAATCCCCATATGTTTTGTATATCAAGGTGAAGGCGGTGATCTTGGAGCCGGGTTCGAGGACGAGTGAGCCAACGAAGCAAGGGATTATAGATTCGGATGGTGAAGTGTTGGCAAGAGGCAAAGGAACGTACAAGTGTCACTTAAACTCTTTGATGCGTTATGATAAGCTACAAATCGTTGTGGATCAAGGGTTGGCTACTTTGTTTACCCCTATTTAA | 1521 | 40.63 | MDQQHILYDEVEVNGSKTALTLSTDGILRWYDHVNVLRCLSVDGEVLGVSIVGQQIIIRSFVETDGFCFAICNRGLTRKSFAFEALSENSLQNLYDKIQGYIDTLGRPKKLFIFVNPFGGRKSASKIFTDDVKPILEDANIEYTLQETKYQLHAKEVSHSLDLTKYDGILCVSGDGILVEVVNGLLEREDWQVALKMPIGVVPAGTGNGMIKSLLDAAGQPCTVAYAMLSVIQGHKRSLDVATIWQGEARFFSVLMLAWGKIKVVSFYKHSLLFIDFFNTCNWFLLFLFLFFEGLIADIDIESEQYRWMGGARMDIYGLQRVLSLRKYNGCISFVPASGFEDVGEPASVVVEPLKTRHHGYEGPKVDLGGSSWRKIDGPFVGVWLQNVSWGSENAKAAPDAKFDDGYLDLIVMRECPKLRLLSLMSEMSNGHYVKSPYVLYIKVKAVILEPGSRTSEPTKQGIIDSDGEVLARGKGTYKCHLNSLMRYDKLQIVVDQGLATLFTPI | 506 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04079 | 506 | ProSiteProfiles | DAG-kinase catalytic (DAGKc) domain profile. | 106 | 248 | IPR001206 | GO:0016301(InterPro) | |
| Stre1g04079 | 506 | Pfam | YegS C-terminal NAD kinase beta sandwich-like domain | 386 | 474 | IPR045540 | - | |
| Stre1g04079 | 506 | Gene3D | - | 91 | 239 | IPR017438 | - | |
| Stre1g04079 | 506 | FunFam | Sphingosine kinase 2 | 94 | 239 | - | - | |
| Stre1g04079 | 506 | PANTHER | SPHINGOSINE KINASE | 77 | 474 | IPR050187 | GO:0001727(PANTHER)|GO:0005737(PANTHER)|GO:0006665(PANTHER)|GO:0016020(PANTHER)|GO:0016310(PANTHER)|GO:0043231(PANTHER)|GO:0046512(PANTHER) | |
| Stre1g04079 | 506 | SUPERFAMILY | NAD kinase-diacylglycerol kinase-like | 107 | 481 | IPR016064 | - | |
| Stre1g04079 | 506 | Gene3D | - | 284 | 486 | - | - | |
| Stre1g04079 | 506 | SMART | dagk-c4a-7 | 110 | 245 | IPR001206 | GO:0016301(InterPro) | |
| Stre1g04079 | 506 | Pfam | Diacylglycerol kinase catalytic domain | 110 | 243 | IPR001206 | GO:0016301(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04079 | K04718 | sphingosine kinase [EC:2.7.1.91] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:125677450 | Stre4g00371 | Stre-Chr4:52518747 | dispersed |