AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04084 ATGAGAGACGCTAAATCATGGAGGAATCTATTGAAAAGACACCTCCATTTTGATTGGGGACGTTATGGAATGAAGATGAAACCGTTTATGGGAGTTGCATTTATTATAATGCTGTATATTGTGTATAGAACCACAAATTATCAGTATCTCCAAACAGAGCTGGACTCTAGATTTGATTCACTCTATTCATCAAAGGAATATGCTTTAACTTCTACAAGTTTAAAAGGTTTACCTCGCGGTATTATTGAAGCTAAATCTGACTTGGAATTAAAGCCTTTATGGTCAACAAGTAATTCAAAATCAAAGAGTGATGTTTCCGATACGCATAACTTGTTAGCTGTTCCAGTGGGTCTCAAACAAAAGCGTAATGTTAATACTATAGTTCAAAAGTTTCTGAAAGAAAATTTTACAGTTATCTTATTCCATTATGATGGGAAGGTTGATGGCTGGCGGGATCTTGATTGGCATAACAAAGTCATACATATTGTAGCTCAGAACCAAACAAAGTGGTGGTTTGCAAAGCGATTTCTGCATCCTGCTGCTGTGTCTATTTATGATTATATATTTCTCTGGGATGAAGATTTAGGAGTGCAACATTTCAATCCCCGAAGGTATTTGAATATTGTAAAAGCAGAAGGATTAGAAATATCACAGCCAGCTTTAGATCCAAATTCAACTTATATACATCATCGTATCACGATACGAAAGAGAATGAATAAGTTTCACAGGAGAGTTTATGACAGCAGAGGCAGTGTGAAATGTTCAAACGATAGTGAGGGTCCACCTTGTTCTGGATTTGTAGAAGGAATGGTCCCGGTTTTCTCTAGAGCTGCATGGCATTGTGCTTGGCATCTTATTCAGAATGACCTTGTTCATGGATGGGGAATGGATATGAAACTTGGCTACTGTGCACAGGGGGACCGTTCGAAGAAGGTTGGAGTCGTTGATAGTGAATTTATCGTGCATCAAGGCATACAAACGTTAGGCGGGGCTTCTGCTAAAAAGACATCTAATCATGTGGATGTATCAAAGAAACGCGCTCCCGCCATTGATGTTCGAGCTGAGATAAGGAGGCAATCGACAACGGAGCTTCAAATATTTAAAAAACGGTGGGAAAAGGCTGTGAAAGAGGACACATGGTGGGTGGATCCGTTTTACAGACGAAAACAAGTACAAACCTAG 1182 39.17 MRDAKSWRNLLKRHLHFDWGRYGMKMKPFMGVAFIIMLYIVYRTTNYQYLQTELDSRFDSLYSSKEYALTSTSLKGLPRGIIEAKSDLELKPLWSTSNSKSKSDVSDTHNLLAVPVGLKQKRNVNTIVQKFLKENFTVILFHYDGKVDGWRDLDWHNKVIHIVAQNQTKWWFAKRFLHPAAVSIYDYIFLWDEDLGVQHFNPRRYLNIVKAEGLEISQPALDPNSTYIHHRITIRKRMNKFHRRVYDSRGSVKCSNDSEGPPCSGFVEGMVPVFSRAAWHCAWHLIQNDLVHGWGMDMKLGYCAQGDRSKKVGVVDSEFIVHQGIQTLGGASAKKTSNHVDVSKKRAPAIDVRAEIRRQSTTELQIFKKRWEKAVKEDTWWVDPFYRRKQVQT 393
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04084 393 Pfam Protein of unknown function (DUF707) 74 377 IPR007877 -
Stre1g04084 393 PANTHER OS06G0731900 PROTEIN 32 380 IPR007877 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04084 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:125751526 Stre4g00385 Stre-Chr4:53233999 dispersed
Stre Stre-Chr1:125751526 Stre6g03343 Stre-Chr6:99160405 wgd