AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04108 ATGGCTGGACTAAGTGGTTCATCTTTAGCTGTGCTTGAAGGTAGTCTCCAGTTCAACGGCTTAACCCGTTTGAACCCGATCGGGAATTGTCGGGTTGGTGTTGCACGGACCGGACTTGTTGTTAAAGCCCAACAAGGCGAAACCGAGACCAGCCGTAGAGCTGTGTTGGGGCTCATTGCCACTGGACTAGCCTCGGGTTCGTTTGTTCAAGCTGTACTTGCTGATGCTAAACCGATCAAGCTCGGCCCACCCCCACCACCCTCCGGTGGACTTCCCGGAACCCTGAACTCCGATGAGGCAAGAGACCTTGATTTACCTTTAAAGAACAGGTTCTACTTGCAACCATTGCCACCAACAGAGGCTGCAGCTCGCGCAAAAGAATCAGCAAAGGAGATACTAAATGTTAAAGAGTTCATTGACAAAAAAGCATGGCCGTATGTCCAGAACGATCTTCGTTTGAAGTCGAATTACCTTCGTTTTGACCTCAACACCGTCATTGCCGCTAAGCCAAAGAAGAAAAGCAACAACTCAAAGATCTCACCGGAAAGCTTTTCCAAGACATGGCAGACTTGGACCATGCAGCAAAGATCAAAAGCTCAGCTGAAGCAGAGAAGAGTTACGCAGCAGCTGTATCTAGTCTTAACGATGTTCTCGCGAAACTAG 663 48.87 MAGLSGSSLAVLEGSLQFNGLTRLNPIGNCRVGVARTGLVVKAQQGETETSRRAVLGLIATGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDEARDLDLPLKNRFYLQPLPPTEAAARAKESAKEILNVKEFIDKKAWPYVQNDLRLKSNYLRFDLNTVIAAKPKKKSNNSKISPESFSKTWQTWTMQQRSKAQLKQRRVTQQLYLVLTMFSRN 220
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04108 220 Gene3D - 75 210 IPR023222 -
Stre1g04108 220 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 41 173 IPR054099 GO:0009507(PANTHER)|GO:0009767(PANTHER)|GO:0045156(PANTHER)
Stre1g04108 220 MobiDBLite consensus disorder prediction 79 99 - -
Stre1g04108 220 SUPERFAMILY Oxygen-evolving enhancer protein 3, 111 174 IPR023222 -
Stre1g04108 220 Pfam Oxygen evolving enhancer protein 3 28 174 IPR008797 GO:0005509(InterPro)|GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0019898(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04108 K08901 photosystem II oxygen-evolving enhancer protein 3