AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04115 ATGACATCAGCAATATCCGAACCCACAACCGCCGGCAACCCGATTTCCGAACGTTCTCCGACTCCAAATTCCCAAAAGCTCAGAAACAGTAGCTCCCAACTGAACCGTTGGTCTCGAGCTCGAGTCATCAGGTCTGGCCGTAAGCTGGACCGCCATGTTCAACCTAAACAGCACCACAACACACAAACCACTGATCCACAGTTCACTCACTCAGCAGATGTTGATCCGCTGATTACTAGTCCGAGTTTCTCTTCGAGTTCGTCGGAAGATGATACTGGAGGACAGACGGAGGAAGCCGTCGTTAAAGGGAAGGAGATATACATGGTTTCCGACGGATCAGGACGGACGGCGGAGCATTCCGTCACCGCCGCGTTAGGTCAATTTGAACATTTTATGATTGACGGTGGTTGTCCGGTTTATACTCGCTTGTTTTCTGGGATTAATGACTCAAACCGGCTTATGGAGATCATAATGCAAGCAGCAAAAGAAGATGCAATCCTCATTTACACACTAGCTGATGAAAAACTTGCAGAATCAGCTCAACAAGCCTGCAAATTATGGGGTGTACGATCAACAGATGTTCTTAGACCAATCACAGACGCGATCGCATCCTATTTAGGAATCTCACCCACCGGACTCCCTCGTGGGGCCCACGGGAGACGATTACCACTAACTGAAGATTACTTTAAACGAATCGACGCGATTGAATTTACCATTAAACAAGATGATGGTGCTTTTTCACAGAACTTGCATAAGGCTGACATTGTTGTTGTTGGTGTATCGCGGTCTGGTAAGACTCCATTGTCAATTTATTTGGCTCAAAAAGGATTTAAAGTGGCAAATGTGCCTATTGTTAAAGGTGTTGACTTGCCTAAAACTCTGTTTGAGATTGACCAGAAAAAAGTCTTTGCTTTGACTTTGAATCCTGTTATACTGCAAACTATAAGATTAGCAAGAGCTAATAGTTTAGGGTATCATGAAGATGATAGAGGTGATTATGCAGAGATGGTTAATGTAAAAGAGGAGCTGGATTATGCTAACAAGATTTTCACACAAAATCCGAGTTGGCCAGTTATCGAAGTAACTGGTAAAGCGATCGAAGAAACCGCGGCTATCATATTGAGAGTCTATCAAGACCGGAAACATGGATCATCCATGCCGAGAATCTCAAAGCTGTACTATTAA 1185 44.22 MTSAISEPTTAGNPISERSPTPNSQKLRNSSSQLNRWSRARVIRSGRKLDRHVQPKQHHNTQTTDPQFTHSADVDPLITSPSFSSSSSEDDTGGQTEEAVVKGKEIYMVSDGSGRTAEHSVTAALGQFEHFMIDGGCPVYTRLFSGINDSNRLMEIIMQAAKEDAILIYTLADEKLAESAQQACKLWGVRSTDVLRPITDAIASYLGISPTGLPRGAHGRRLPLTEDYFKRIDAIEFTIKQDDGAFSQNLHKADIVVVGVSRSGKTPLSIYLAQKGFKVANVPIVKGVDLPKTLFEIDQKKVFALTLNPVILQTIRLARANSLGYHEDDRGDYAEMVNVKEELDYANKIFTQNPSWPVIEVTGKAIEETAAIILRVYQDRKHGSSMPRISKLYY 394
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04115 394 PANTHER PYRUVATE, PHOSPHATE DIKINASE REGULATORY PROTEIN 1, CHLOROPLASTIC 16 393 IPR005177 GO:0005524(InterPro)|GO:0016772(InterPro)
Stre1g04115 394 MobiDBLite consensus disorder prediction 43 58 - -
Stre1g04115 394 Hamap Putative pyruvate, phosphate dikinase regulatory protein. 104 379 IPR026565 -
Stre1g04115 394 MobiDBLite consensus disorder prediction 1 97 - -
Stre1g04115 394 MobiDBLite consensus disorder prediction 59 94 - -
Stre1g04115 394 Pfam Kinase-pyrophosphorylase 106 374 IPR005177 GO:0005524(InterPro)|GO:0016772(InterPro)
Stre1g04115 394 MobiDBLite consensus disorder prediction 1 39 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04115 K20115 [pyruvate, phosphate dikinase]-phosphate phosphotransferase / [pyruvate, phosphate dikinase] kinase [EC:2.7.4.27 2.7.11.32]
Stre1g04115 K09773 [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:126154427 Stre6g03390 Stre-Chr6:99846975 wgd