Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04116 | ATGGCTACGACGTCGTTTCGCTCTTACGCCGTCGTATCGCTTCTCATGATCTTCTTCATACAACCTTCGATCTCCATCTACTGTGACGAAGATGATTGCTACGATCTACTCGGGGTCTCGCAAAATGCTAATTCATCTGAAATCAAGAGAGCTTACTACAAGCTCTCGTTAAAGCATCATCCGGATAAAAACCCAGATCCTGAATCGAAAAAGTTGTTTGTTAAAATTGCGAATGCTTATGAGATATTAAAAGATGAAGTTACAAGAGGCCAGTATGATTATGCAATTGAGCATCCAGAGGAGGTATTCTACAATACAGCTCGCTATTATCATGCTTACTATGGTCACAAAACTGATCCTCGTGCTGTTTTGGTGGGACTTCTTATAGTCCTTTCGGGAATTCAATATCTAAATCAATGGACAAGGTATCATCAGGCTATTGACATGGTAAAGAGGACACCAGCTTATAAAAATAAATTAAAGGCATTAGAACTCGAACGCACGGGGGCAATTTCAAGCAAAAAGAAGAATGGTTACAAGATCGACAAGAAATTGCAGGAAGATATTAGCAAGGAACTTGAATTGCAGATAAAAGGTGCTGAAAAACCATCAATATGGGGACTTCTTGGTGCTCGTTTCATACTTTTGCCATATACTCTTGGAAAGCTAGTTTTATGGTATGGATGTTGGTATTGGAGGTACAAGATAAACAAAACTTCATATTCTTGGGAAGACGCGTCTTATTTGACTAGACGCGCTCTCGGAGCACCTTCTGAATCATGGGAATATCTTGATGAATCAACCAAGAAAGATCTCATCGATCGACACTTATGGGTAAAGTCCAACTTAGAGAACTATCTTTTCGAGATGCGAAAAGAGTCAAAGAGAAGAAGGTAA | 897 | 39.58 | MATTSFRSYAVVSLLMIFFIQPSISIYCDEDDCYDLLGVSQNANSSEIKRAYYKLSLKHHPDKNPDPESKKLFVKIANAYEILKDEVTRGQYDYAIEHPEEVFYNTARYYHAYYGHKTDPRAVLVGLLIVLSGIQYLNQWTRYHQAIDMVKRTPAYKNKLKALELERTGAISSKKKNGYKIDKKLQEDISKELELQIKGAEKPSIWGLLGARFILLPYTLGKLVLWYGCWYWRYKINKTSYSWEDASYLTRRALGAPSESWEYLDESTKKDLIDRHLWVKSNLENYLFEMRKESKRRR | 298 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04116 | 298 | FunFam | Chaperone protein dnaJ 50 | 19 | 119 | - | - | |
| Stre1g04116 | 298 | SMART | dnaj-3 | 31 | 88 | IPR001623 | - | |
| Stre1g04116 | 298 | SUPERFAMILY | Chaperone J-domain | 27 | 106 | IPR036869 | - | |
| Stre1g04116 | 298 | ProSitePatterns | Nt-dnaJ domain signature. | 73 | 92 | IPR018253 | - | |
| Stre1g04116 | 298 | Gene3D | DnaJ domain | 20 | 119 | IPR036869 | - | |
| Stre1g04116 | 298 | CDD | DnaJ | 32 | 85 | IPR001623 | - | |
| Stre1g04116 | 298 | ProSiteProfiles | dnaJ domain profile. | 32 | 96 | IPR001623 | - | |
| Stre1g04116 | 298 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER 25 | 8 | 298 | IPR044632 | GO:0005789(PANTHER)|GO:0006457(InterPro)|GO:0006457(PANTHER) | |
| Stre1g04116 | 298 | Pfam | DnaJ domain | 32 | 93 | IPR001623 | - | |
| Stre1g04116 | 298 | PRINTS | DnaJ domain signature | 34 | 52 | IPR001623 | - | |
| Stre1g04116 | 298 | PRINTS | DnaJ domain signature | 68 | 88 | IPR001623 | - | |
| Stre1g04116 | 298 | PRINTS | DnaJ domain signature | 52 | 67 | IPR001623 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04116 | K19371 | DnaJ homolog subfamily C member 25 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:126176934 | Stre6g02974 | Stre-Chr6:93131871 | dispersed | |
| Stre | Stre-Chr1:126176934 | Stre7g02548 | Stre-Chr7:99289178 | transposed |