Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre1g04237	ATGTGCATCATGGATGCCAATCAAGAAGGACCTTGCGATTACGGTGATACGGTCATTGTAATCAACAATGAAAATGTTAAACATATCGAAGAAGCATCAAAGATTCAAGAAAACAACATTCATGAAGCGAATGAAGATAACTTCTTCCTTAATGGTCTTCCAGGACGAGTACTCGCAAATAAGGTGTTTGAAGAGCTAATATTACTAGGAAAATCAGCATGTCCGGTAGCAACAACCACCTTCCTGGTGTACTCAAAGTCCATAATCTCATTGCTCTTTTTAAGCCACATTGGAAAATCTGAATTAGCAGGAGTTGTTCTAGCTCTTGGTTTTGCCAATATCACATGTGTGTCAATCATGAAAGGACTATGCATGGGAATGGATCCCATTTGTTTTCAAGCTTTTGGGGCCAAGCGGTTCTCGGTCCTTACCCAAACATACCTCAAAACCTTCTTCCTACTCTTGTTCATTTCCATTCCTATCACATTCCTATGGCTAAACATCGAACCTGTTTTATACGCGCTTGGTCAAGACCGCGATATCACAAAGGTTGCAGCCACTTTCTTACACTTATCTCTCCTAGAACTCCCAGCCCTGGCTCACCTCTTACCATTTCGCGCTTTTCTAAGGACACAAGGATTAAACTCACCCACAACCATTGTTGCCACTTGTGCCACAATCCTACACCTCCCTATTAATTACTTTCTGGTTAGCTACTTACAACTTGGAATAAAGGGCATTGCATTGGCTTCAACATTATTCACATATAACATGAATCTTGGGTTACTACTCTACGTTTACATGTCAAATGTTGCGATCAAACCTTCGATTTCCAAGATCAACATTGCTTCACTTTTAAAGGGTTGGGGGCCATTGCTTAGCTTATCAATCCCTAGTGTTTGTTCTGTTTGTTTGGAGTGGTGGTTGTATGAAATCATTCTTTTTCTTAGCGGCTTGTTTGCGAATCCTCAATCTTGTGTGGCTACAACCGGGATCATAATGCAACTAACAGGAATAGTCTATGTGTTACCATTTTCTTTAAGTTTAAGCATATCACAACGCGTAGGGCATGAACTAGGGGGAGGGCAACCGGCTCGTGCACAATGGGCCGCTGCTATTGGGCTATGCACCGCTTTTACATATGGGCTTGTGATACTTGCACTATACATCTCTTTAAGAAATGTTCTTGGAATGTTGTACACGCATGAACCCGAAATTCTTATCATGCTTTCGTCCGCGTTACCAGTCATAGGGCTTGCGGAAGTTGGAAACGCGCTACAAACGGCTGCATGCGGGGTTTTGACCGGTTCAGCCAGACCCAAAGTAGGGGTTAAGATAAACATTGCTGCCTTTTACCTTGTTGGGCTTCCGACATCAATTGTGTTGGCTTTCATGTTCAAGCTCGGTTACCAAGGGTTGTGGCTCGGAATGGTTGCATCACAGGCTGCTTGTGCATTGTTGATGGTCTATACTTTGATCAAAACAGATTGGAGGGATCAGGCGAAGAGAGCTGAGGAGCTGACTTTGATTGTGAATAAGGATGATATGGAGTCAATAGAACTTGTCTCATGA	1572	42.75	MCIMDANQEGPCDYGDTVIVINNENVKHIEEASKIQENNIHEANEDNFFLNGLPGRVLANKVFEELILLGKSACPVATTTFLVYSKSIISLLFLSHIGKSELAGVVLALGFANITCVSIMKGLCMGMDPICFQAFGAKRFSVLTQTYLKTFFLLLFISIPITFLWLNIEPVLYALGQDRDITKVAATFLHLSLLELPALAHLLPFRAFLRTQGLNSPTTIVATCATILHLPINYFLVSYLQLGIKGIALASTLFTYNMNLGLLLYVYMSNVAIKPSISKINIASLLKGWGPLLSLSIPSVCSVCLEWWLYEIILFLSGLFANPQSCVATTGIIMQLTGIVYVLPFSLSLSISQRVGHELGGGQPARAQWAAAIGLCTAFTYGLVILALYISLRNVLGMLYTHEPEILIMLSSALPVIGLAEVGNALQTAACGVLTGSARPKVGVKINIAAFYLVGLPTSIVLAFMFKLGYQGLWLGMVASQAACALLMVYTLIKTDWRDQAKRAEELTLIVNKDDMESIELVS	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre1g04237	523	Pfam	MatE	75	235	IPR002528	GO:0015297(InterPro)\|GO:0016020(InterPro)\|GO:0042910(InterPro)\|GO:0055085(InterPro)
	Stre1g04237	523	Pfam	MatE	298	460	IPR002528	GO:0015297(InterPro)\|GO:0016020(InterPro)\|GO:0042910(InterPro)\|GO:0055085(InterPro)
	Stre1g04237	523	Coils	Coil	26	46	-	-
	Stre1g04237	523	NCBIfam	MATE family efflux transporter	75	474	IPR002528	GO:0015297(InterPro)\|GO:0016020(InterPro)\|GO:0042910(InterPro)\|GO:0055085(InterPro)
	Stre1g04237	523	PANTHER	MULTIDRUG RESISTANCE PROTEIN	58	500	-	GO:0016020(PANTHER)\|GO:0022857(PANTHER)
	Stre1g04237	523	CDD	MATE-eukaryotic	65	503	IPR045069	GO:0042910(InterPro)\|GO:1990961(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre1g04237	K03327	MATE family, multidrug and toxin extrusion protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5190702	Stre	Stre1g04237	Stre-Chr1:128288008	Stre7g02344	Stre-Chr7:94967429
	5226873	Stre	Stre1g03896	Stre-Chr1:123255813	Stre1g04237	Stre-Chr1:128288008
	5227656	Stre	Stre1g04237	Stre-Chr1:128288008	Stre3g00462	Stre-Chr3:6312511