Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04255 | ATGAGTTGTCAAAAGAGATATAACTTTTATGAAGTTTTCACACGGGGGACTTCTCAAAACCAAACCAATATTTATACGAATTACGAAGAAAAGGAGCAATTGGTTTCAATCGTCGTCGGAAACCTCAAATTTCAGGGTAAACCCACTTCATTTGTTTTAAACATTCAAATGGGACTTTGCTTCTCATCGGTTCCGGCTGATGAAGATGTATCCGATAGTCATCATCAGTTTGCGGGAGGTAACGTGACTCTGATCACCACCAAGAACGTTTGGGACCAAACGCTGTCTGAAGCAAAGAATCAAGGAAAAGTATTAATTGCCAATTTTAGTGCCTCATGGTGTGGTCCATGCAAATCAATTGCGTCTTACTACATTGAGCTATCGGAGAAATATCCATCTCTTATGTTTGTGACGATAGATGTTGATGAATTAACGGATTTTAGCACACAAATGGAAATAAACGTGACTCCCACATTCTTCTTCTTTAAAGACGGTAAACAAATTGATAAACTTGTTGGAGCCAACAAACCTGAATTGCAGAAAAAGATAACCACCATTGTTGATTCACAAGCACCCACGGCTCACATGTAA | 591 | 38.92 | MSCQKRYNFYEVFTRGTSQNQTNIYTNYEEKEQLVSIVVGNLKFQGKPTSFVLNIQMGLCFSSVPADEDVSDSHHQFAGGNVTLITTKNVWDQTLSEAKNQGKVLIANFSASWCGPCKSIASYYIELSEKYPSLMFVTIDVDELTDFSTQMEINVTPTFFFFKDGKQIDKLVGANKPELQKKITTIVDSQAPTAHM | 196 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04255 | 196 | Gene3D | Glutaredoxin | 57 | 194 | - | - | |
| Stre1g04255 | 196 | ProSitePatterns | Thioredoxin family active site. | 106 | 124 | IPR017937 | - | |
| Stre1g04255 | 196 | Pfam | Thioredoxin | 84 | 184 | IPR013766 | - | |
| Stre1g04255 | 196 | SUPERFAMILY | Thioredoxin-like | 78 | 187 | IPR036249 | - | |
| Stre1g04255 | 196 | FunFam | Thioredoxin | 79 | 188 | - | - | |
| Stre1g04255 | 196 | ProSiteProfiles | Thioredoxin domain profile. | 55 | 188 | IPR013766 | - | |
| Stre1g04255 | 196 | CDD | TRX-family | 93 | 183 | - | - | |
| Stre1g04255 | 196 | PANTHER | THIOREDOXIN | 80 | 185 | IPR050620 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04255 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 159134 | Stre1g04255 | Stre6g02534 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5190717 | Stre | Stre1g04255 | Stre-Chr1:128466298 | Stre7g01084 | Stre-Chr7:39894535 | |
| 5221183 | Stre | Stre3g02287 | Stre-Chr3:33624773 | Stre1g04255 | Stre-Chr1:128466298 | |
| 5228191 | Stre | Stre1g04255 | Stre-Chr1:128466298 | Stre6g01092 | Stre-Chr6:51245679 |