AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04257 ATGAATCGGAATTCTTCTAAGAACTCGTTAATTATCGATCGAAATCTCCGTGGTATGTATAATGCTCCGGTGGCTAGATTATCATCTCACAGGCGAATCATGAGTTTCTCCACCACCGAGGATTGTGGCAATAACAATAGCAACAGCTTGGATCTCTTTTCACGTAATCGTCGTTCTCTCTCCGTCGCATCTTCCGATGAATCCGACTGGCAGGTGAGGTTGGATAGGCTTTCAGTTGGATTGACAAAACCTGCAAAAAGCATATTAGATGATCTACTTTCATCTAATGAAGGAGGACATCATGATGATGACTGGTTATTAACTCCTCCAGAAACTCAACCAAAATCAGTTTCCCAAAAAAGAAATTCTTCAGTCAGATCAGACTCTAAAAACAGAACCTCAAGGCTTTCTGTTTCTCAGTCTGAGATTAAACATCCTGCAAAACCTGCAAGAAGCAGTTCAGTAACTCGCACATCAATCTCTACCACACAAAACATAAACAAAAATTCAAACATTTTAAACACCAGCTCTGCTTCTATCTCATCTTACATAAGATCATCCACCCCAGCCAACCTTCCACCATCAACCGCCAGACCCACCACCGCTTCCGCCCGTACAACACCTTCTAGAAGCCGCCAATCCACCATTAACAGAACCATCAGACCATCAACTTCTACAACCCGTCCTCAATCACCAACTGTTCAACCATCTTCTCATCCATCAACTCCAACTCATAGGAAATCAACATCCTTAAATAACCGAATTGTGGGACCCACATACAAGGCTCGCCTGATCAATCATCCTGATTTTCCGAATGAAACGCCGCCAAATCTTATAACAAGTGTGCCAGAAAGACCTGTTTCTGCTGGTAGGTCTAGACCAGGTGCAGCATTGACTATTTTCGCTAGCGGACGAGTTGCAGAACCGCCTGCAAGGGGGCGGTTAGATCTTAACGGGCATGCGGTTGAATCAGTTACAAGAAAACCTATAAAGGTGTTAAATTCAGAGAATGTTTCAGGGTTTGAGAGGAGTATTTCAAAGAAATCACTTAACATGGCTATAAGACATTTGGATATAAGAACCGGAAGCGCGCGTCCACTTTCTGGGTCAACACGCTTTCCTCAAAGCATTCGATCGAGTCATAGTTCAAGTGCAAGCAACAATGTTAACTCCAATAATAGAAATATAAAAAACGGTTTTTCAATGAAACCCGTAAGCATAGAACATAAAACTCAATGTCATTCTAAACTAACACGAGTCGACGTATACGAGAGCTTGAGGTATGACTCGATTTTACAAAAAGAAGACTTGAAGAACACAAGTTGGTTGCACAATGCAGATGAAAAGAGTAATCAAAGTGCGTTGTTTGATCATGGATTTGAGTCACTTCCTGAACCTTTTGCCCCCTTTTGA 1413 42.04 MNRNSSKNSLIIDRNLRGMYNAPVARLSSHRRIMSFSTTEDCGNNNSNSLDLFSRNRRSLSVASSDESDWQVRLDRLSVGLTKPAKSILDDLLSSNEGGHHDDDWLLTPPETQPKSVSQKRNSSVRSDSKNRTSRLSVSQSEIKHPAKPARSSSVTRTSISTTQNINKNSNILNTSSASISSYIRSSTPANLPPSTARPTTASARTTPSRSRQSTINRTIRPSTSTTRPQSPTVQPSSHPSTPTHRKSTSLNNRIVGPTYKARLINHPDFPNETPPNLITSVPERPVSAGRSRPGAALTIFASGRVAEPPARGRLDLNGHAVESVTRKPIKVLNSENVSGFERSISKKSLNMAIRHLDIRTGSARPLSGSTRFPQSIRSSHSSSASNNVNSNNRNIKNGFSMKPVSIEHKTQCHSKLTRVDVYESLRYDSILQKEDLKNTSWLHNADEKSNQSALFDHGFESLPEPFAPF 470
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04257 470 PANTHER GASTRIC MUCIN-LIKE PROTEIN 33 452 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Stre1g04257 470 MobiDBLite consensus disorder prediction 364 397 - -
Stre1g04257 470 MobiDBLite consensus disorder prediction 111 141 - -
Stre1g04257 470 MobiDBLite consensus disorder prediction 184 256 - -
Stre1g04257 470 MobiDBLite consensus disorder prediction 151 167 - -
Stre1g04257 470 MobiDBLite consensus disorder prediction 363 397 - -
Stre1g04257 470 MobiDBLite consensus disorder prediction 100 167 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04257 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
159135 Stre1g04257 Stre8g00190
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5190718 Stre Stre1g04257 Stre-Chr1:128482001 Stre5g00911 Stre-Chr5:30055376
5228939 Stre Stre1g04257 Stre-Chr1:128482001 Stre8g00190 Stre-Chr8:3864236