Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04259 | ATGCAGACTGCATCATCTCCCGCATTATGTGGTATCGTTCCTGTAGATTGCGTCTTCAATTGTTCAAATCAGCTACCGTATGCTTCCAATTTCAGTTTGGGGTTGTCGACAGGTAGCAGAAAGCTGAAGCTTTCTAGGTTGCAGGCTGGATTTTGGGAATCCATTAGATCTGGGTTAATAAAGAACAACTCTACACAGGTTATAGAGCCATCTTCAAGTTTCCAAGAAGATGAAGAACCTCTTCTAGAGGAATTTGTACTTGTTGAAAAAACGTTACCAGATGGAACCGTTGAACAAATTATTTTTTCTTCTGGTGCAGAAGTTGATGTATATGATCTTCAAGCCTTGTGCGACAAGGTTGGTTGGCCAAGAAGACCATTAACAAAGCTAGCTGCTGCATTGAGAAATAGTTACATGGTAGCAACATTGCATTCCATAAAGAAATCAGCCAATGAAGAATTAACAGAAGCCGTTAATGAAAAGAAACTCATTGGTATGGCTCGTGCCACATCAGATCATGCATTTAATGCAACAATATGGGATGTCCTTGTAGATCCTAATTACCAGGGGCAAGGTCTTGGAAAAGCTTTAATTGAGAAGCTTATAAGAGCTTTACTTCAGAGGGATATTGGCAACATATCATTATTTGCAGACAGTAAAGTTGTGGAATTTTATAGAAATTTAGGATTTGAACCCGACCCAGAGGGCATTAAAGGTATGTTTTGGTATCCAAGGTTTTAG | 741 | 39.27 | MQTASSPALCGIVPVDCVFNCSNQLPYASNFSLGLSTGSRKLKLSRLQAGFWESIRSGLIKNNSTQVIEPSSSFQEDEEPLLEEFVLVEKTLPDGTVEQIIFSSGAEVDVYDLQALCDKVGWPRRPLTKLAAALRNSYMVATLHSIKKSANEELTEAVNEKKLIGMARATSDHAFNATIWDVLVDPNYQGQGLGKALIEKLIRALLQRDIGNISLFADSKVVEFYRNLGFEPDPEGIKGMFWYPRF | 246 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04259 | 246 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 100 | 246 | IPR000182 | GO:0016747(InterPro) | |
| Stre1g04259 | 246 | Gene3D | - | 104 | 243 | - | - | |
| Stre1g04259 | 246 | CDD | NAT-SF | 157 | 215 | - | - | |
| Stre1g04259 | 246 | Pfam | Acetyltransferase (GNAT) family | 137 | 230 | IPR000182 | GO:0016747(InterPro) | |
| Stre1g04259 | 246 | FunFam | Putative acetyltransferase NSI | 104 | 243 | - | - | |
| Stre1g04259 | 246 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 109 | 236 | IPR016181 | - | |
| Stre1g04259 | 246 | PANTHER | ACYL-COA N-ACYLTRANSFERASE | 30 | 244 | IPR045039 | GO:0005737(PANTHER)|GO:0008080(PANTHER)|GO:0008080(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04259 | K22450 | aralkylamine N-acetyltransferase [EC:2.3.1.87] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5190720 | Stre | Stre1g04259 | Stre-Chr1:128500354 | Stre4g01795 | Stre-Chr4:95582897 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Stre | Acetyltransf_1 | 2.2e-15 | CL0257 | TR | GNAT |