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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04262 ATGAGGCTTCAATTTCGCAGTTCAGCTAAACTTGTTCTGTTAATTTGGTTCATCTGGTGGCCAATAGTTGAACCTCAAGTAACTAATCCTCTACCAAAGCCTGCAAGAGCTCTTGATGCAACCCTACAGGACTATGCATTTCGTGCATTTGTTAATCCACGTACTGGTATCCCCTTCGATGGTATCGTCCCGCCATTTTTGACCGGAATTGAGATATCAGCATTGAGACTCAGAAGCGGTAGTTTATACCGTAGAGGCGTTCAAACCTATAAAGAATTCTTGATTCCAACTGGCTTAAGAGAGCAACCATATGTTGAGAGACTTGTTTTGGTCTATCAAAACTTAAAAAATTGGTCGACAACTTATTACTCTTTACCAGGTTACATCTATCTAGCTCCCATATTAGGTCTTCTTGCTTACAACGGTACAGATTTATCAGCTTCTAATCAACCAGAACTCGACTTTTGGGCTTCTGAGGAACCGATTGCAATAAAGTTTGGAAGAATAAGTCCGACACCAGTTGGTTTGGTTGCAAAGTGTGCTTGGTTTGACCTTCATGGTCAAGTGAATTTCACAAAAATGTTAACCGGAAATGTATGTTTAACCACTGAACAAGGTCATTTCTCCATTGTTGCTAAATCAACTGTCCCTCATGTTCTAGTACCTCCTGCAGCACCTGAATCTGAATCATCTAAACATACACATAACAGTAGAAAAATCGAGGAGAGAATTTGGGGAATTGTTGGTTCAGCAACAGGTGGAACCGCGTTGCTGGTGTTATTAGCATTGCTCATATTGTGGGCATGGAGATACAATAAAAGAAAAAGAATGCGCGAATTAGAAAGAGCTGCAGATGCTGGTGAAGCATTGAGGATGACCAGAATTGGAAGCATGAGAGCACCATTTGCATTGGGCACGAGAACAATGCCGAATTTTGAAAGCGATTTTGGTCTTTGA 957 41.07 MRLQFRSSAKLVLLIWFIWWPIVEPQVTNPLPKPARALDATLQDYAFRAFVNPRTGIPFDGIVPPFLTGIEISALRLRSGSLYRRGVQTYKEFLIPTGLREQPYVERLVLVYQNLKNWSTTYYSLPGYIYLAPILGLLAYNGTDLSASNQPELDFWASEEPIAIKFGRISPTPVGLVAKCAWFDLHGQVNFTKMLTGNVCLTTEQGHFSIVAKSTVPHVLVPPAAPESESSKHTHNSRKIEERIWGIVGSATGGTALLVLLALLILWAWRYNKRKRMRELERAADAGEALRMTRIGSMRAPFALGTRTMPNFESDFGL 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04262 318 Pfam Protein of unknown function (DUF1191) 34 212 IPR010605 -
Stre1g04262 318 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 12 316 IPR010605 GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04262 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159136 Stre1g04262 Stre8g00198
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5182866 Stre Stre10g00823 Stre-Chr10:18052092 Stre1g04262 Stre-Chr1:128532371
5182928 Stre Stre10g00904 Stre-Chr10:19921692 Stre1g04262 Stre-Chr1:128532371
5190723 Stre Stre1g04262 Stre-Chr1:128532371 Stre8g00711 Stre-Chr8:15799202
5211437 Stre Stre1g04262 Stre-Chr1:128532371 Stre1g04267 Stre-Chr1:128625427
5228192 Stre Stre1g04262 Stre-Chr1:128532371 Stre6g01084 Stre-Chr6:50646785
5228940 Stre Stre1g04262 Stre-Chr1:128532371 Stre8g00198 Stre-Chr8:4017437