AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04263 ATGCCGTACCGTCGACGGCAGGGACTTTCTAGGTCTTCCACCTTCAAGGAAGAAATTCTCCGGCAGCCGGACCAAGATGACGCCACCACATCCTCCACCGGTCCGCCACACAGAGCTTCCGATTTTCGTCTCAACTCATTTCGCTCCTCTACCGACTTTCACTCCTCGTTTAAAAACCGATGCAAGAGTTCTGCTACCTTCGATCGTACTTCAACGAGTAGGAATGAACCAGGAGGATTTTGGGGCGTTTTAGCAAGGAAAGCTAAATCCATTCTGGTAGATGACAATTCTAAACAATCGAATACTTCTAGCAATAAGAAGCCAGAAACAATTAGTTTCTTAACAAGCAGTCAGTTTACTGGAATTCAAGTTCATCATCAACAAAAATCACATGAGAAGTCTAAGAAAACGATCAATCCAACATTAATGATTGGGTTGGATTCACTCATGCCTTCTCTAAATCAAACTGGTGTCACCATTGAGAATGCTTTGGAGGTAGAGAAGAAAACTCAAGATATCATTCAAGAAACTCATGATCTACAAAACAGGAGAAGAACATTTGATAAACAAGAAAATAATCTAGAAACTCAACTTCAGGCTTCTCGCGACGTGGCATTGGCAACGGTTGCTAAGGTAAAACAACTTGTTCGGGAGCTGAAAACTGTGACTGCAGAATTGGCATCTACAAACGCGCGATGTTGTCAACTAGAAGAAGAAAATAATTGCTTCAGGCGGATACGTGTTCAACTAGAGACGCTATTGGTGGAGAAGGGGTGTTTGGCACACGCGAATTCGGTATTTGTTCGTGAGAATAGGTTTTTGAGGGAATTAGTTGAATTCCATCAACTGAAAATGAAAGATATGGTGTATTTGGATGAGGGAATCAAAGAAAGCTTCCATGAGCCGGTGGAGGAACTCGATACTTTGACTAGGTTTGACTGA 942 42.46 MPYRRRQGLSRSSTFKEEILRQPDQDDATTSSTGPPHRASDFRLNSFRSSTDFHSSFKNRCKSSATFDRTSTSRNEPGGFWGVLARKAKSILVDDNSKQSNTSSNKKPETISFLTSSQFTGIQVHHQQKSHEKSKKTINPTLMIGLDSLMPSLNQTGVTIENALEVEKKTQDIIQETHDLQNRRRTFDKQENNLETQLQASRDVALATVAKVKQLVRELKTVTAELASTNARCCQLEEENNCFRRIRVQLETLLVEKGCLAHANSVFVRENRFLRELVEFHQLKMKDMVYLDEGIKESFHEPVEELDTLTRFD 313
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04263 313 Coils Coil 212 232 - -
Stre1g04263 313 MobiDBLite consensus disorder prediction 1 44 - -
Stre1g04263 313 MobiDBLite consensus disorder prediction 25 44 - -
Stre1g04263 313 PANTHER UNCHARACTERIZED 1 299 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04263 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159137 Stre1g04263 Stre8g00199
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5190724 Stre Stre1g04263 Stre-Chr1:128535498 Stre6g01259 Stre-Chr6:58339140
5211438 Stre Stre1g04263 Stre-Chr1:128535498 Stre1g04268 Stre-Chr1:128629139
5228193 Stre Stre1g04263 Stre-Chr1:128535498 Stre6g01082 Stre-Chr6:50602364
5228941 Stre Stre1g04263 Stre-Chr1:128535498 Stre8g00199 Stre-Chr8:4020693