AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04267 ATGAGGCTTCAATTTCGCAGTTCAGCTAAACTTGTTCTGTTAATTTGGTTCATCTGGTGGCCAATAGTTGAACCTCAAGTAACTAATCCTCTACCAAAGCCTGCAAGAGCTCTTGATGCAACCCTACAGGACTATGCATTTCGTGCATTTGTTAATCCACGTACTGGTATCCCCTTCGATGGTATCGTCCCGCCATTTTTGACCGGAATTGAGATATCAGCATTGAGACTCAGAAGCGGTAGTTTATACCGTAGAGGCGTTCAAACCTATAAAGAATTCTTGATTCCAACTGGCTTAAGAGAGCAACCATATGTTGAGAGACTTGTTTTGGTCTATCAAAACTTAAAAAATTGGTCGACAACTTATTACTCTTTACCAGGTTACATCTATCTAGCTCCCATATTAGGTCTTCTTGCTTACAACGGTACAGATTTATCAGCTTCTAATCAACCAGAACTCGACTTTTGGGCTTCTGAGGAACCGATTGCAATAAAGTTTGGAAGAATAAGTCCGACACCAGTTGGTTTGGTTGCAAAGTGTGCTTGGTTTGACCTTCATGGTCAAGTGAATTTCACAAAAATGTTAACCGGAAATGTATGTTTAACCACTGAACAAGGGCATTTCTCCATTGTTGCTAAATCAACTGTCCCTCATGTTCTAGTACCTCCTGCAGCACCTGAATCTGAATCATCTAAACATACACATAACAGTAGAAAAATCGAGGAGAGAATTTGGGGAATTGTTGGTTCAGCAACAGGTGGAACCGCGTTGCTGGTGTTATTAGCATTGCTCATATTGTGGGCATGGAGATACAATAAAAGAAAAAGAATGCGCGAATTAGAAAGAGCTGCAGATGCTGGTGAAGCATTGAGGATGACCAGAATTGGAAGCATGAGAGCACCATTTGCATTGGGCACGAGAACAATGCCGAATTTTGAAAGCGATTTTGGTCTTTGA 957 41.17 MRLQFRSSAKLVLLIWFIWWPIVEPQVTNPLPKPARALDATLQDYAFRAFVNPRTGIPFDGIVPPFLTGIEISALRLRSGSLYRRGVQTYKEFLIPTGLREQPYVERLVLVYQNLKNWSTTYYSLPGYIYLAPILGLLAYNGTDLSASNQPELDFWASEEPIAIKFGRISPTPVGLVAKCAWFDLHGQVNFTKMLTGNVCLTTEQGHFSIVAKSTVPHVLVPPAAPESESSKHTHNSRKIEERIWGIVGSATGGTALLVLLALLILWAWRYNKRKRMRELERAADAGEALRMTRIGSMRAPFALGTRTMPNFESDFGL 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04267 318 Pfam Protein of unknown function (DUF1191) 34 212 IPR010605 -
Stre1g04267 318 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 12 316 IPR010605 GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04267 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5190727 Stre Stre1g04267 Stre-Chr1:128625427 Stre6g01084 Stre-Chr6:50646785
5211437 Stre Stre1g04262 Stre-Chr1:128532371 Stre1g04267 Stre-Chr1:128625427