AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04268 ATGCCGTACCGTCGACGGCAGGGACTTTCTAGGTCTTCCACCTTCAAGGAAGAAATTCTCCGGCAGCCGGACCAAGATGACGCCACCACATCCTCCACCGGTCCGCCACACAGAGCTTCCGATTATCGTTTCAACTCATTCCGCTCCTCTAGCGACTCTCACTCGTTTAAAAACCGATGCAAGAGTTCTGCTACCTTCGATCGTACTTCAACGAGTAGGAATGAACCAGGAGGATTTTGGGGCGTTTTAGCAAGGAAAGCTAAATCCATTCTGGAAGATGACAATTCTAAACAATCGAATACTTCTAGCAATAAGAAGCCAGAAACAATTAGTTTCTCAACAAGCAGTCAGTTCACTGGAATTCAAGTTCATCATCAACATAAATCACTTGAGAAGTCTAAGAAAATGAGCAATCCAACATTAATGATTGGGTTGGATGCACTCATGCCTTCTCTAAATCAAACTGATGTCACCATTGAGAATGCTTTGGAGACAGAGAAGAAAACTCAAGATATCATTCAAGAAACTCATGATCTACAAAACAGGAGAAGAACATGTGATAACCAAGAAAAGAATCTAGAAACTCAACTTCAGGCTTCTCGCGACGTGGCACTGGCAACGGTTGCTAAGGTAAAACAACTTGTTCGGGAGCTGAAAACTGTGACTACAGAATTGGCATCTACAAACACGCGATGTTGTCAACTAGAAGAAGAAAATAAATTGCTTCAAGCGAGCCGAGAACAGAGAGACCATCCTGCAGATGACATGATACGCGTTCAACTAGAGACGCTATTGGTGGAGAAGGGGTGTTTGGCACACGCGAATTCGGAATTTGTTCGTGAGAATAGGTTTTTGAGGGAATTAGTTGAATTCCATCAACTGAAAATGAAAGATATGGTGTATTTGGATGAGGAAATCAAAGAAAGCTTTCAAGAGCCGATGGAGGAACTCGATACTTTGACTAGGTTTGACTGA 975 42.87 MPYRRRQGLSRSSTFKEEILRQPDQDDATTSSTGPPHRASDYRFNSFRSSSDSHSFKNRCKSSATFDRTSTSRNEPGGFWGVLARKAKSILEDDNSKQSNTSSNKKPETISFSTSSQFTGIQVHHQHKSLEKSKKMSNPTLMIGLDALMPSLNQTDVTIENALETEKKTQDIIQETHDLQNRRRTCDNQEKNLETQLQASRDVALATVAKVKQLVRELKTVTTELASTNTRCCQLEEENKLLQASREQRDHPADDMIRVQLETLLVEKGCLAHANSEFVRENRFLRELVEFHQLKMKDMVYLDEEIKESFQEPMEELDTLTRFD 324
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04268 324 MobiDBLite consensus disorder prediction 91 115 - -
Stre1g04268 324 MobiDBLite consensus disorder prediction 94 115 - -
Stre1g04268 324 Coils Coil 211 231 - -
Stre1g04268 324 MobiDBLite consensus disorder prediction 1 79 - -
Stre1g04268 324 MobiDBLite consensus disorder prediction 25 76 - -
Stre1g04268 324 PANTHER UNCHARACTERIZED 1 310 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04268 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5190728 Stre Stre1g04268 Stre-Chr1:128629139 Stre8g00199 Stre-Chr8:4020693
5211438 Stre Stre1g04263 Stre-Chr1:128535498 Stre1g04268 Stre-Chr1:128629139